Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015-
06-02] 587 sequences; 52,178,999 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq8 96.9 4e-18
>seq8
Length=1106993
Score = 96.9 bits (106), Expect = 4e-18
Identities = 134/184 (73%), Gaps = 13/184 (7%)
Strand=Plus/Plus
Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65
|||||||||||| ||||||||| | ||||||| ||| | |||| |||| |||
Sbjct 167 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAATTGTGCTTGAAT--ATTT 224
Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121
| ||||||||||||||||| || | |||||||||||||| ||||| || || |
Sbjct 225 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 283
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
|||||||| |||| | | | |||||| | |||| || | ||||||||||||
Sbjct 284 GGTAATGATTAATAGGAACAAACGGGGGCATTCGTATCGCTACGTTAGAGGTGAAATTCT 343
Query 182 TGGA 185
||||
Sbjct 344 TGGA 347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511997088480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |