Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongyloides_20venezuelensis_20[genbank_20GCA_5F001028725.1_202015- 06-02] 587 sequences; 52,178,999 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq415 300 3e-79 >seq415 Length=1542 Score = 300 bits (332), Expect = 3e-79 Identities = 262/321 (82%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| ||||||||||||||||||| | |||||||||||||||| |||| ||||||| Sbjct 1031 AGTGCATGTGGTGGATGCCTTGGCGATCAGAGGCGATGAAGGACGTGATAGCCTGCGATA 1090 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| | |||||||||| |||||||||||||||||||||| Sbjct 1091 AGCTTCGGGGAGCTGGCAAATAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCACT 1150 Query 121 CCTTTGG-GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAA 179 || || | || ||||| ||||||||||| |||| | |||||| || ||||||||| Sbjct 1151 GCTAAGGAGGTATCGCATGATGAATACATAGTCATGCGAGGCGAACCGGGTGAACTGAAA 1210 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 |||||||||| | |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1211 CATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCTAAGTAGTGGCGAGCGAAC 1270 Query 240 TGGGATGAGCCTTTACGAGAT-AGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCC 298 |||| |||| ||| || | | |||| || |||||||| ||||||||| | ||| Sbjct 1271 GGGGACCAGCCCTTA--AGCTGATTTGATTT--TAGTGGAACGCTCTGGAAAGTGCGGCC 1326 Query 299 ATAGCGGGTGATAGCCCCGTA 319 |||| |||||||||||| ||| Sbjct 1327 ATAGAGGGTGATAGCCCTGTA 1347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918394608992