Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02]
15,010 sequences; 90,131,014 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq3970 343 3e-92
seq8184 208 1e-51
seq347 185 1e-44
seq5755 150 3e-34
>seq3970
Length=725
Score = 343 bits (380), Expect = 3e-92
Identities = 231/258 (90%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 437 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGT 378
Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 377 AGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCG 318
Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 317 AAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 258
Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACA 275
|||||||||||| ||||||| || ||| || | |||||||||||| |||||
Sbjct 257 GTAACTTTTCTGACACCTCTTGCTAGAAACTTTATAATTCAAAAGGATCGATAAGCCACG 198
Query 276 CTTTCATGGTTTGTATTC 293
||||| ||| |||||||
Sbjct 197 CTTTCGCGGTCTGTATTC 180
>seq8184
Length=9037
Score = 208 bits (230), Expect = 1e-51
Identities = 124/130 (95%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 130 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGT 71
Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 70 GGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCG 11
Query 156 AAGGATCAAA 165
||||||||||
Sbjct 10 AAGGATCAAA 1
>seq347
Length=2538
Score = 185 bits (204), Expect = 1e-44
Identities = 132/152 (87%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 142 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGC 201
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2538 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGC 2479
Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261
|||||||||||||||||||||||||| ||||||| || ||| || | |||||
Sbjct 2478 CAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTAGAAACTTTATAATTCAAAAGG 2419
Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||||||| ||||| ||||| ||| |||||||
Sbjct 2418 ATCGATAAGCCACGCTTTCGCGGTCTGTATTC 2387
>seq5755
Length=530
Score = 150 bits (166), Expect = 3e-34
Identities = 113/133 (85%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1 TCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 60
Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280
||||||| ||||||| || ||| || | |||||||||||| ||||| |||||
Sbjct 61 TTTTCTGACACCTCTTGCTAGAAACTTTATAATTCAAAAGGATCGATAAGCCACGCTTTC 120
Query 281 ATGGTTTGTATTC 293
||| |||||||
Sbjct 121 GCGGTCTGTATTC 133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854271754560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |