Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq3970 343 3e-92 seq8184 208 1e-51 seq347 185 1e-44 seq5755 150 3e-34 >seq3970 Length=725 Score = 343 bits (380), Expect = 3e-92 Identities = 231/258 (90%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 437 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGT 378 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 377 AGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCG 318 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 317 AAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 258 Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACA 275 |||||||||||| ||||||| || ||| || | |||||||||||| ||||| Sbjct 257 GTAACTTTTCTGACACCTCTTGCTAGAAACTTTATAATTCAAAAGGATCGATAAGCCACG 198 Query 276 CTTTCATGGTTTGTATTC 293 ||||| ||| ||||||| Sbjct 197 CTTTCGCGGTCTGTATTC 180 >seq8184 Length=9037 Score = 208 bits (230), Expect = 1e-51 Identities = 124/130 (95%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 130 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGT 71 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 70 GGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCG 11 Query 156 AAGGATCAAA 165 |||||||||| Sbjct 10 AAGGATCAAA 1 >seq347 Length=2538 Score = 185 bits (204), Expect = 1e-44 Identities = 132/152 (87%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 142 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGC 201 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2538 AAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGC 2479 Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261 |||||||||||||||||||||||||| ||||||| || ||| || | ||||| Sbjct 2478 CAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTAGAAACTTTATAATTCAAAAGG 2419 Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||| ||||| ||||| ||| ||||||| Sbjct 2418 ATCGATAAGCCACGCTTTCGCGGTCTGTATTC 2387 >seq5755 Length=530 Score = 150 bits (166), Expect = 3e-34 Identities = 113/133 (85%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1 TCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 60 Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||||||| ||||||| || ||| || | |||||||||||| ||||| ||||| Sbjct 61 TTTTCTGACACCTCTTGCTAGAAACTTTATAATTCAAAAGGATCGATAAGCCACGCTTTC 120 Query 281 ATGGTTTGTATTC 293 ||| ||||||| Sbjct 121 GCGGTCTGTATTC 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854271754560