Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02]
15,010 sequences; 90,131,014 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq5755 73.4 8e-11
seq3970 73.4 8e-11
seq347 73.4 8e-11
>seq5755
Length=530
Score = 73.4 bits (80), Expect = 8e-11
Identities = 86/115 (75%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171
||||||||||| |||| ||||||||||||||||| | || |||| ||||||| ||| |
Sbjct 273 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAACAGTAACGCAGGTG 214
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226
|| ||| ||||| ||| ||||||| || | || |||||||||||
Sbjct 213 TCCTAAGGCGAGCTCAGAGAGGACGGAAACCTCTCGTAGAGCAAAAAGGCAAAAG 159
>seq3970
Length=725
Score = 73.4 bits (80), Expect = 8e-11
Identities = 86/115 (75%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171
||||||||||| |||| ||||||||||||||||| | || |||| ||||||| ||| |
Sbjct 40 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAACAGTAACGCAGGTG 99
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226
|| ||| ||||| ||| ||||||| || | || |||||||||||
Sbjct 100 TCCTAAGGCGAGCTCAGAGAGGACGGAAACCTCTCGTAGAGCAAAAAGGCAAAAG 154
>seq347
Length=2538
Score = 73.4 bits (80), Expect = 8e-11
Identities = 86/115 (75%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171
||||||||||| |||| ||||||||||||||||| | || |||| ||||||| ||| |
Sbjct 2247 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAACAGTAACGCAGGTG 2306
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226
|| ||| ||||| ||| ||||||| || | || |||||||||||
Sbjct 2307 TCCTAAGGCGAGCTCAGAGAGGACGGAAACCTCTCGTAGAGCAAAAAGGCAAAAG 2361
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982252541760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |