Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq5755 73.4 8e-11 seq3970 73.4 8e-11 seq347 73.4 8e-11 >seq5755 Length=530 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| ||||||| ||| | Sbjct 273 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAACAGTAACGCAGGTG 214 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| ||||| ||| ||||||| || | || ||||||||||| Sbjct 213 TCCTAAGGCGAGCTCAGAGAGGACGGAAACCTCTCGTAGAGCAAAAAGGCAAAAG 159 >seq3970 Length=725 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| ||||||| ||| | Sbjct 40 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAACAGTAACGCAGGTG 99 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| ||||| ||| ||||||| || | || ||||||||||| Sbjct 100 TCCTAAGGCGAGCTCAGAGAGGACGGAAACCTCTCGTAGAGCAAAAAGGCAAAAG 154 >seq347 Length=2538 Score = 73.4 bits (80), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT-CGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||||||| |||| ||||||||||||||||| | || |||| ||||||| ||| | Sbjct 2247 GACAGTGTCAGGCGGGGAGTTTGACTGGGGCGGTACATCTGTCAAACAGTAACGCAGGTG 2306 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAG 226 || ||| ||||| ||| ||||||| || | || ||||||||||| Sbjct 2307 TCCTAAGGCGAGCTCAGAGAGGACGGAAACCTCTCGTAGAGCAAAAAGGCAAAAG 2361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982252541760