Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02]
15,010 sequences; 90,131,014 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq8821 352 9e-95
seq5857 262 1e-67
seq6015 201 3e-49
>seq8821
Length=1095
Score = 352 bits (390), Expect = 9e-95
Identities = 363/467 (78%), Gaps = 7/467 (1%)
Strand=Plus/Minus
Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102
||||| | |||||||||||| | | | || |||||||||||||||||||||||| |||
Sbjct 1086 TATTTTTCGTCACTACCTCCTCATTCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCATCC 1027
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
|| || || || ||| |||||||||| || |||||||| || |||||| || | ||||||
Sbjct 1026 TTAGACGTAGTGGCCATTTCTCAGGCCCCTTCTCCGGAGTCAAACCCTTATCCTCCGTTA 967
Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222
||||| |||||||||| | || ||||||||||||||||||| |||||| | |||
Sbjct 966 CCCGTCACCACCATGGTAGTCAGATACACTACCATCGAAAGTTGATAAGGCAGATACTTG 907
Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGA 282
|| || | ||||||| |||| ||||||||| | | ||||||| ||| ||| ||| |
Sbjct 906 AAAGACACGTCGCCGGTGCAAGACCATGCGATCAGCTTAGTTATTCTGAGTCAACAAAAA 847
Query 283 GCCCCGAAGGGCG-TTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTC-GGGGT 338
| | ||| || |||||||| | |||||||||| ||| | ||||| | ||| | | |
Sbjct 846 ACGACCGAGGTCGCTTGGTTTTGT-TCTAATAAATGCACTCTTTCCGTAAGGTCAGAGCT 788
Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGTAAGGTACTATCAA 397
|| |||||||||||||||||||||||||| |||||||| || || ||| | |||||
Sbjct 787 TTGGTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGAAAGTCAAGATCAA 728
Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457
|||| ||| ||| | ||||||||| ||||| ||||||| || | || | ||||||||
Sbjct 727 GTAAATTATAGCTGTTATAATGAGCCGTTCGCGGTTTCACGATAGA-ATCGTTTATACTT 669
Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| |||||||||||||||||||||| | | || || | | | |||||
Sbjct 668 ATACATGCATGGCTTAATCTTTGAAATGAACACATCAGTTCAGGCAG 622
>seq5857
Length=565
Score = 262 bits (290), Expect = 1e-67
Identities = 272/349 (78%), Gaps = 7/349 (2%)
Strand=Plus/Minus
Query 138 GGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCAT 197
||| || |||||| || | ||||||||||| |||||||||| | || |||||||
Sbjct 356 GGAGTCAAACCCTTATCCTCCGTTACCCGTCACCACCATGGTAGTCAGATACACTACCAT 297
Query 198 CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCG 257
|||||||||||| |||||| | ||||| || | ||||||| |||| ||||||||| |
Sbjct 296 CGAAAGTTGATAAGGCAGATACTTGAAAGACACGTCGCCGGTGCAAGACCATGCGATCAG 237
Query 258 TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCG-TTGGTTTTTTATCTAATAAAT 316
| ||||||| ||| ||| ||| | | | ||| || |||||||| | ||||||||||
Sbjct 236 CTTAGTTATTCTGAGTCAACAAAAAACGACCGAGGTCGCTTGGTTTTGT-TCTAATAAAT 178
Query 317 ACACCCCTTCCG--AAGTC-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373
||| | ||||| | ||| | | ||| |||||||||||||||||||||||||| |||
Sbjct 177 GCACTCTTTCCGTAAGGTCAGAGCTTTGGTGCATGTATTAGCTCTAGAATTACCACAGTT 118
Query 374 ATCCATGTAGTAAGGT-ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGT 432
||||| |||| || || | ||||| |||| ||| ||| | ||||||||| ||||| ||
Sbjct 117 ATCCAAGTAGGAAAGTCAAGATCAAGTAAATTATAGCTGTTATAATGAGCCGTTCGCGGT 58
Query 433 TTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481
||||| || | || | ||||||||| ||||||||||||||||||||||
Sbjct 57 TTCACGATAGA-ATCGTTTATACTTATACATGCATGGCTTAATCTTTGA 10
>seq6015
Length=522
Score = 201 bits (222), Expect = 3e-49
Identities = 223/291 (77%), Gaps = 6/291 (2%)
Strand=Plus/Plus
Query 138 GGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCAT 197
||| || |||||| || | ||||||||||| |||||||||| | || |||||||
Sbjct 233 GGAGTCAAACCCTTATCCTCCGTTACCCGTCACCACCATGGTAGTCAGATACACTACCAT 292
Query 198 CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCG 257
|||||||||||| |||||| | ||||| || | ||||||| |||| ||||||||| |
Sbjct 293 CGAAAGTTGATAAGGCAGATACTTGAAAGACACGTCGCCGGTGCAAGACCATGCGATCAG 352
Query 258 TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCG-TTGGTTTTTTATCTAATAAAT 316
| ||||||| ||| ||| ||| | | | ||| || |||||||| | ||||||||||
Sbjct 353 CTTAGTTATTCTGAGTCAACAAAAAACGACCGAGGTCGCTTGGTTTTGT-TCTAATAAAT 411
Query 317 ACACCCCTTCCG--AAGTC-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373
||| | ||||| | ||| | | ||| |||||||||||||||||||||||||| |||
Sbjct 412 GCACTCTTTCCGTAAGGTCAGAGCTTTGGTGCATGTATTAGCTCTAGAATTACCACAGTT 471
Query 374 ATCCATGTAGTAAGGT-ACTATCAAATAAACGATAACTGATTTAATGAGCC 423
||||| |||| || || | ||||| |||| ||| ||| | |||||||||
Sbjct 472 ATCCAAGTAGGAAAGTCAAGATCAAGTAAATTATAGCTGTTATAATGAGCC 522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510173288960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |