Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq8821 352 9e-95 seq5857 262 1e-67 seq6015 201 3e-49 >seq8821 Length=1095 Score = 352 bits (390), Expect = 9e-95 Identities = 363/467 (78%), Gaps = 7/467 (1%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | |||||||||||| | | | || |||||||||||||||||||||||| ||| Sbjct 1086 TATTTTTCGTCACTACCTCCTCATTCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCATCC 1027 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || || || || ||| |||||||||| || |||||||| || |||||| || | |||||| Sbjct 1026 TTAGACGTAGTGGCCATTTCTCAGGCCCCTTCTCCGGAGTCAAACCCTTATCCTCCGTTA 967 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| |||||||||| | || ||||||||||||||||||| |||||| | ||| Sbjct 966 CCCGTCACCACCATGGTAGTCAGATACACTACCATCGAAAGTTGATAAGGCAGATACTTG 907 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGA 282 || || | ||||||| |||| ||||||||| | | ||||||| ||| ||| ||| | Sbjct 906 AAAGACACGTCGCCGGTGCAAGACCATGCGATCAGCTTAGTTATTCTGAGTCAACAAAAA 847 Query 283 GCCCCGAAGGGCG-TTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTC-GGGGT 338 | | ||| || |||||||| | |||||||||| ||| | ||||| | ||| | | | Sbjct 846 ACGACCGAGGTCGCTTGGTTTTGT-TCTAATAAATGCACTCTTTCCGTAAGGTCAGAGCT 788 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGTAAGGTACTATCAA 397 || |||||||||||||||||||||||||| |||||||| || || ||| | ||||| Sbjct 787 TTGGTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGAAAGTCAAGATCAA 728 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 |||| ||| ||| | ||||||||| ||||| ||||||| || | || | |||||||| Sbjct 727 GTAAATTATAGCTGTTATAATGAGCCGTTCGCGGTTTCACGATAGA-ATCGTTTATACTT 669 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | |||||||||||||||||||||| | | || || | | | ||||| Sbjct 668 ATACATGCATGGCTTAATCTTTGAAATGAACACATCAGTTCAGGCAG 622 >seq5857 Length=565 Score = 262 bits (290), Expect = 1e-67 Identities = 272/349 (78%), Gaps = 7/349 (2%) Strand=Plus/Minus Query 138 GGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCAT 197 ||| || |||||| || | ||||||||||| |||||||||| | || ||||||| Sbjct 356 GGAGTCAAACCCTTATCCTCCGTTACCCGTCACCACCATGGTAGTCAGATACACTACCAT 297 Query 198 CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCG 257 |||||||||||| |||||| | ||||| || | ||||||| |||| ||||||||| | Sbjct 296 CGAAAGTTGATAAGGCAGATACTTGAAAGACACGTCGCCGGTGCAAGACCATGCGATCAG 237 Query 258 TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCG-TTGGTTTTTTATCTAATAAAT 316 | ||||||| ||| ||| ||| | | | ||| || |||||||| | |||||||||| Sbjct 236 CTTAGTTATTCTGAGTCAACAAAAAACGACCGAGGTCGCTTGGTTTTGT-TCTAATAAAT 178 Query 317 ACACCCCTTCCG--AAGTC-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373 ||| | ||||| | ||| | | ||| |||||||||||||||||||||||||| ||| Sbjct 177 GCACTCTTTCCGTAAGGTCAGAGCTTTGGTGCATGTATTAGCTCTAGAATTACCACAGTT 118 Query 374 ATCCATGTAGTAAGGT-ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGT 432 ||||| |||| || || | ||||| |||| ||| ||| | ||||||||| ||||| || Sbjct 117 ATCCAAGTAGGAAAGTCAAGATCAAGTAAATTATAGCTGTTATAATGAGCCGTTCGCGGT 58 Query 433 TTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 ||||| || | || | ||||||||| |||||||||||||||||||||| Sbjct 57 TTCACGATAGA-ATCGTTTATACTTATACATGCATGGCTTAATCTTTGA 10 >seq6015 Length=522 Score = 201 bits (222), Expect = 3e-49 Identities = 223/291 (77%), Gaps = 6/291 (2%) Strand=Plus/Plus Query 138 GGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCAT 197 ||| || |||||| || | ||||||||||| |||||||||| | || ||||||| Sbjct 233 GGAGTCAAACCCTTATCCTCCGTTACCCGTCACCACCATGGTAGTCAGATACACTACCAT 292 Query 198 CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCG 257 |||||||||||| |||||| | ||||| || | ||||||| |||| ||||||||| | Sbjct 293 CGAAAGTTGATAAGGCAGATACTTGAAAGACACGTCGCCGGTGCAAGACCATGCGATCAG 352 Query 258 TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCG-TTGGTTTTTTATCTAATAAAT 316 | ||||||| ||| ||| ||| | | | ||| || |||||||| | |||||||||| Sbjct 353 CTTAGTTATTCTGAGTCAACAAAAAACGACCGAGGTCGCTTGGTTTTGT-TCTAATAAAT 411 Query 317 ACACCCCTTCCG--AAGTC-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373 ||| | ||||| | ||| | | ||| |||||||||||||||||||||||||| ||| Sbjct 412 GCACTCTTTCCGTAAGGTCAGAGCTTTGGTGCATGTATTAGCTCTAGAATTACCACAGTT 471 Query 374 ATCCATGTAGTAAGGT-ACTATCAAATAAACGATAACTGATTTAATGAGCC 423 ||||| |||| || || | ||||| |||| ||| ||| | ||||||||| Sbjct 472 ATCCAAGTAGGAAAGTCAAGATCAAGTAAATTATAGCTGTTATAATGAGCC 522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510173288960