Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14012 82.4 6e-11 seq4940 82.4 6e-11 >seq14012 Length=40231 Score = 82.4 bits (90), Expect = 6e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 61258 GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317 || |||||||| || ||||||||||| ||||||| | || || || |||||||| || Sbjct 1880 GAGCGTTTCGCTCAAGAGGTGCAAGTCCCGGAGGCTAGATGCTTTTATGGCTTCCAAATC 1821 Query 61318 GCCATGGAGAATGTCCACTCGGAGATGTAC 61347 ||||| || || ||||||| ||||||||| Sbjct 1820 GCCATCGAAAACATCCACTCCGAGATGTAC 1791 >seq4940 Length=754 Score = 82.4 bits (90), Expect = 6e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 61258 GAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317 || |||||||| || ||||||||||| ||||||| | || || || |||||||| || Sbjct 376 GAGCGTTTCGCTCAAGAGGTGCAAGTCCCGGAGGCTAGATGCTTTTATGGCTTCCAAATC 317 Query 61318 GCCATGGAGAATGTCCACTCGGAGATGTAC 61347 ||||| || || ||||||| ||||||||| Sbjct 316 GCCATCGAAAACATCCACTCCGAGATGTAC 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397495271146400