Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24]
3,879 sequences; 99,093,317 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq3187 232 2e-58
seq3578 75.2 3e-11
>seq3187
Length=1114
Score = 232 bits (256), Expect = 2e-58
Identities = 218/278 (78%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCG 61
|||| || | |||||||||| | | | ||||||||| |||| ||| ||||||| |
Sbjct 787 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCGAGTTCATGGTTGAGACAGTG 846
Query 62 CCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 121
| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 TCCGGATCATTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 906
Query 122 TAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAG 181
|||||||||||| ||||||||||||||||||||||||||| | | |||||| |
Sbjct 907 TAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCACTTCACTGCTTCGATTGCT 966
Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241
|| || | | ||||||||||||||||||||||| |||| | ||||| | |||
Sbjct 967 CTGACAGCTCCGCTTAACCTTCCGGCACCGGGCAGGTGTCAGGCTGTATACCGCGCCTTG 1026
Query 242 CGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
|| || ||| || |||||||||| |||||||| ||
Sbjct 1027 CGGCTTCGCACAGCCCTGTGTTTTTGCTAAACAGTTGC 1064
>seq3578
Length=696
Score = 75.2 bits (82), Expect = 3e-11
Identities = 67/84 (80%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 343 CCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402
|||| |||||||||||||| | | ||||||||||||||| || ||||||| ||||
Sbjct 93 CCTTATCCCGAAGTTACGGGGTCAATTTGCCTAGTTCCTTAACCATGATTCTCTCGAGCG 152
Query 403 CCTTGGTATTCTCTACCCAACCAC 426
||| |||| ||||||| |||||
Sbjct 153 CCTCAGTATGTTCTACCCGACCAC 176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260751093568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |