Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24] 3,879 sequences; 99,093,317 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq3187 206 3e-51 >seq3187 Length=1114 Score = 206 bits (228), Expect = 3e-51 Identities = 134/151 (89%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| | Sbjct 767 CGGGGTCTTTTCGTCCCGTTGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCG 826 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || ||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 827 AGTTCATGGTTGAGACAGTGTCCGGATCATTACACCATTCGTGCAGGTCGGAACTTACCC 886 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 887 GACAAGGAATTTCGCTACCTTAGGACCGTTA 917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547179437421