Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24]
3,879 sequences; 99,093,317 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq2930 264 2e-68
>seq2930
Length=1850
Score = 264 bits (292), Expect = 2e-68
Identities = 261/335 (78%), Gaps = 18/335 (5%)
Strand=Plus/Minus
Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61
||||||||||||| |||||| | | | |||||||| ||| ||| ||||| |||| ||||
Sbjct 973 TTTACAATCCGAAAACCTTCATCCTC-CACGCGGCGTTG-CTGCTTCAGGGTTTCCCCCA 916
Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121
||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 915 TTGAGCAATATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 856
Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181
||| | | ||| |||||||| || | ||| || | |||||||||||||||||||||||
Sbjct 855 GTGTCCGTTCACCCTCTCAGGCCGGATACCCGTCATAGCCTTGGTGAGCCATTACCTCAC 796
Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241
|||| |||| || ||| |||||| |||| |||||| || || ||||
Sbjct 795 CAACAAGCTGATAGGACATAGGCTGATCTCATAGCGAAA------AA---------CTTT 751
Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAGG 301
| |||||||| |||| | |||||| ||||||| | | ||||| |||| |||
Sbjct 750 CCCCCGTAGGGAGTATCCAGTATTAATCATCGTTTCCAATGGCTATCCTAGACTATGAGG 691
Query 302 CAGAT-TCCTAGGCATTACTCACCCGTCCGCCGCT 335
|| || |||| ||||||||||||||| |||| ||
Sbjct 690 CACATAACCTATGCATTACTCACCCGTGCGCCACT 656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071958417120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |