Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24] 3,879 sequences; 99,093,317 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq2930 185 2e-44 >seq2930 Length=1850 Score = 185 bits (204), Expect = 2e-44 Identities = 138/162 (85%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||||| |||||||||||||||||| ||||||| ||| ||||||||||||||||| Sbjct 942 GGCGTTGCTGCTTCAGGGTTTCCCCCATTGAGCAATATTCCCTACTGCTGCCTCCCGTAG 883 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||| ||||||| |||||||| |||| |||| | Sbjct 882 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGTCCGTTCACCCTCTCAGGCCGGATACCCGT 823 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGG 162 | | | ||||||| || |||| ||||||||| | || || || Sbjct 822 CATAGCCTTGGTGAGCCATTACCTCACCAACAAGCTGATAGG 781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998361272064