Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24] 3,879 sequences; 99,093,317 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq2930 107 2e-21 >seq2930 Length=1850 Score = 107 bits (118), Expect = 2e-21 Identities = 115/151 (76%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||||||||||| ||| || | ||| | | ||| ||||| || | Sbjct 1840 TCGAGTTGCAGACTACAATCCGAACTGAGAGAAGTTTTATAG-ATTTGCTCCATTTCACA 1782 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || | || ||| | |||||||| ||||||| ||||||| | ||||||||| Sbjct 1781 ATATTGCATCTCTTTGTGCTTCCCATTGTAGCACGTGTGTAGCCCTAGGCGTAAGGGCCA 1722 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCC 151 ||| ||||||||||||||| ||||||||||| Sbjct 1721 TGATGACTTGACGTCATCCTCACCTTCCTCC 1691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415984367630