Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2907 104 4e-20 >seq2907 Length=2095 Score = 104 bits (114), Expect = 4e-20 Identities = 186/266 (70%), Gaps = 23/266 (9%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT---GCTCGAATACATTAGCAT 130 ||||| ||||||||||||||||| | || || ||| | | ||| |||||| |||| Sbjct 979 TTTACCTTGAAAAAATTAGAGTGCTTAACGCGGGCTTATAATGCTTGAATACTCGTGCAT 1038 Query 131 GGAATAATAGAATAGGA-CGTGCG-GTT------CTATTTTGTTGGTTTC---------T 173 |||||||| ||||||| | || ||| ||||||||||||||| | Sbjct 1039 GGAATAATGAAATAGGATCTTGATTGTTGTATGCCTATTTTGTTGGTTTAAAACATAAAT 1098 Query 174 AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGT 233 | | | ||||| |||| ||||| | |||||| | |||| || |||||| Sbjct 1099 ACAATTGAGATAATGGTTAAGAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGT 1158 Query 234 GAAATTCTTGGATT-TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTC 292 |||||||||||| || || ||| | ||||||||||| || ||||| |||| ||| Sbjct 1159 GAAATTCTTGGACCGTAGCGA-GACGCCCAACTGCGAAAGCATTTGCCAAGAATGTCTTC 1217 Query 293 ATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| |||||||||| || || Sbjct 1218 ATTAATCA-AGAACGAAAGTCAGAGG 1242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915147119744