Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq933 107 3e-21 >seq933 Length=23572 Score = 107 bits (118), Expect = 3e-21 Identities = 137/187 (73%), Gaps = 14/187 (7%) Strand=Plus/Minus Query 44 AAAACTAACCTGTCTCATGACGGTCTAAACC---CAGCTCACGTTCCCTATTAGTGGGTG 100 ||||||| | ||| ||||||| |||||| | || |||||||| ||||||| ||||| Sbjct 238 AAAACTAGCTTGTTTCATGACAATCTAAATCTAACAACTCACGTTGCCTATTACTGGGTA 179 Query 101 AACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGA 160 |||||||||| ||| ||||||||||| ||||||||| || ||| || ||| || Sbjct 178 AACAATCCAATCTTTAAA-AATTCTGCTTCAAAGTGATAGGAAAAG-CGATATTGAAAGA 121 Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220 |||||||| ||||| | ||| | || | | |||||||| || |||||| | Sbjct 120 TCAAAAAGTAACGTTACCATGGATGCGT---------TATCCAGTTATTCCCGTGGTATC 70 Query 221 TTTTCTG 227 |||| || Sbjct 69 TTTTTTG 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854350632768