Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2907 194 3e-47 seq1077 102 2e-19 >seq2907 Length=2095 Score = 194 bits (214), Expect = 3e-47 Identities = 201/258 (78%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 1643 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 1700 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||| || || || | | | | Sbjct 1701 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 1759 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | || | || || ||||| | | ||| || | || | ||||| | | |||| Sbjct 1760 CCATTGCTGAAAAGTTATGGTAACCCCTTGAAAATCCTCCTTGATCGGGATCGGGAATTG 1819 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||| Sbjct 1820 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 1879 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 1880 ACGTCCCTGCCCTTTGTA 1897 >seq1077 Length=19286 Score = 102 bits (112), Expect = 2e-19 Identities = 165/226 (73%), Gaps = 11/226 (5%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 16347 CTTCTTAGAGGGACAAGCGGTGTTTAGCCGCATGAAGTT-GAG-CAATAACAGGTCTGTG 16404 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||| |||| ||||||||||||| || || || | | | Sbjct 16405 ATGCCCTTAGATGTCCACGGCTGCACACGCGCTACACTGAAGGAAACAGCGCACT-GTAA 16463 Query 191 CCTTGGCCGGAAGGTCTGGGTAA--TCTTGTTAA-ACTCTGTCGTGCTGGGGATAGAGCA 247 || | || | ||||| ||||| |||| || |||||| | ||||| | | | Sbjct 16464 CCATTGCTGAAAGGTTATGGTAACCCCTTGAAAATCCTCTGT--AAATCGGGATCGGGAA 16521 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 ||||| ||||| || || ||| | ||| ||||||||| | | ||| Sbjct 16522 TTGCACTTATTTCT-TTGAAC-ATCAATTCCTAGTAAGTGAGAGTC 16565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947145270784