Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1301 167 1e-38 seq3054 159 1e-36 seq514 159 1e-36 seq94 159 1e-36 seq25 159 1e-36 seq3101 156 2e-35 seq2570 152 2e-34 seq86 145 3e-32 seq1508 141 4e-31 seq888 122 4e-25 seq2390 75.2 5e-11 >seq1301 Length=170485 Score = 167 bits (184), Expect = 1e-38 Identities = 222/311 (71%), Gaps = 32/311 (10%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||| ||| | |||||| ||||||| || Sbjct 169292 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCGAGTCATTGGGTGATAA 169351 Query 465 ACCCGTGCGCGTAATGAAAGTGAACG----------------GAGGTGGGAACC---CG- 504 ||| ||||||||||||| || | || ||||| || || Sbjct 169352 ACCTAAAGGCGTAATGAAAGTAAAAGTCGCCCCGATGCGACCGATATGGGATCCATGCGG 169411 Query 505 ----TGAG-------GGTGCACCATCGACCGATCCTGATGT-CTTCGGATGGATTTGAGT 552 ||| || ||||||| |||| ||| | | ||| || | ||| Sbjct 169412 TTTTTGAATCCGCACGGCGCACCATAGACCCGTCCCCGTTTGCTTGCAATAGGGCGGAGG 169471 Query 553 AAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAG 612 ||||| | | ||||||||||||||||||||||||||||||| || ||||||||| Sbjct 169472 TAGAGCGCATACGCTGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGAATGAAGCCAG 169531 Query 613 AGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGG 672 |||||||||||||||| | || |||||||||| ||||||||||||||||| | ||||| Sbjct 169532 AGGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGG 169591 Query 673 TATAGGGGCGA 683 ||||||||||| Sbjct 169592 TATAGGGGCGA 169602 Score = 159 bits (176), Expect = 1e-36 Identities = 219/310 (71%), Gaps = 31/310 (10%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||| ||| | || ||| ||||||| || Sbjct 164497 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCAAGTCATTGGGTGATAA 164556 Query 465 ACCCGTGCGCGTAATGAAAGTGAACG----------------GAGGTGGGAACC---CG- 504 ||| ||||||||||||| || | || ||||| || || Sbjct 164557 ACCTAAAGGCGTAATGAAAGTAAAAGTCGCCCAGATGCGACCGATATGGGATCCATGCGG 164616 Query 505 ----TGAGG-------GTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 ||| | | ||||||| | || ||| | ||| || | ||| Sbjct 164617 TTTTTGAAGCCGTACGGCGCACCATAGCCCCGTCCCCGTTGCTTGCAATAGGGCGGAGGT 164676 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| | | ||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct 164677 AGAGCGCATACGCTGGTACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGA 164736 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||| | || |||||||||| ||||||||||||||||| | |||||| Sbjct 164737 GGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGT 164796 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 164797 ATAGGGGCGA 164806 >seq3054 Length=284887 Score = 159 bits (176), Expect = 1e-36 Identities = 219/310 (71%), Gaps = 31/310 (10%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||| ||| | || ||| ||||||| || Sbjct 64213 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCAAGTCATTGGGTGATAA 64154 Query 465 ACCCGTGCGCGTAATGAAAGTGAACG----------------GAGGTGGGAACC---CG- 504 ||| ||||||||||||| || | || ||||| || || Sbjct 64153 ACCTAAAGGCGTAATGAAAGTAAAAGTCGCCCAGATGCGACCGATATGGGATCCATGCGG 64094 Query 505 ----TGAGG-------GTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 ||| | | ||||||| | || ||| | ||| || | ||| Sbjct 64093 TTTTTGAAGCCGTACGGCGCACCATAGCCCCGTCCCCGTTGCTTGCAATAGGGCGGAGGT 64034 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| | | ||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct 64033 AGAGCGCATACGCTGGTACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGA 63974 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||| | || |||||||||| ||||||||||||||||| | |||||| Sbjct 63973 GGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGT 63914 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 63913 ATAGGGGCGA 63904 Score = 100 bits (110), Expect = 1e-18 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 || |||||||||||||||||||||| | || |||||||||| |||||||| |||||||| Sbjct 68741 TGGAGCCAGAGGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAACCGATCGTC 68682 Query 664 AAATTTGGGTATAGGGGCGA 683 | |||||||||||||||| Sbjct 68681 TGACTTGGGTATAGGGGCGA 68662 >seq514 Length=193539 Score = 159 bits (176), Expect = 1e-36 Identities = 219/310 (71%), Gaps = 31/310 (10%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||| ||| | || ||| ||||||| || Sbjct 1000 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCAAGTCATTGGGTGATAA 1059 Query 465 ACCCGTGCGCGTAATGAAAGTGAACG----------------GAGGTGGGAACC---CG- 504 ||| ||||||||||||| || | || ||||| || || Sbjct 1060 ACCTAAAGGCGTAATGAAAGTAAAAGTCGCCCAGATGCGACCGATATGGGATCCATGCGG 1119 Query 505 ----TGAGG-------GTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 ||| | | ||||||| | || ||| | ||| || | ||| Sbjct 1120 TTTTTGAAGCCGTACGGCGCACCATAGCCCCGTCCCCGTTGCTTGCAATAGGGCGGAGGT 1179 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| | | ||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct 1180 AGAGCGCATACGCTGGTACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGA 1239 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||| | || |||||||||| ||||||||||||||||| | |||||| Sbjct 1240 GGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGT 1299 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 1300 ATAGGGGCGA 1309 >seq94 Length=177966 Score = 159 bits (176), Expect = 1e-36 Identities = 219/310 (71%), Gaps = 31/310 (10%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||| ||| | || ||| ||||||| || Sbjct 1288 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCAAGTCATTGGGTGATAA 1229 Query 465 ACCCGTGCGCGTAATGAAAGTGAACG----------------GAGGTGGGAACC---CG- 504 ||| ||||||||||||| || | || ||||| || || Sbjct 1228 ACCTAAAGGCGTAATGAAAGTAAAAGTCGCCCAGATGCGACCGATATGGGATCCATGCGG 1169 Query 505 ----TGAGG-------GTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 ||| | | ||||||| | || ||| | ||| || | ||| Sbjct 1168 TTTTTGAAGCCGTACGGCGCACCATAGCCCCGTCCCCGTTGCTTGCAATAGGGCGGAGGT 1109 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| | | ||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct 1108 AGAGCGCATACGCTGGTACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGA 1049 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||| | || |||||||||| ||||||||||||||||| | |||||| Sbjct 1048 GGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGT 989 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 988 ATAGGGGCGA 979 >seq25 Length=70551 Score = 159 bits (176), Expect = 1e-36 Identities = 219/310 (71%), Gaps = 31/310 (10%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||| ||| | || ||| ||||||| || Sbjct 1178 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCAAGTCATTGGGTGATAA 1237 Query 465 ACCCGTGCGCGTAATGAAAGTGAACG----------------GAGGTGGGAACC---CG- 504 ||| ||||||||||||| || | || ||||| || || Sbjct 1238 ACCTAAAGGCGTAATGAAAGTAAAAGTCGCCCAGATGCGACCGATATGGGATCCATGCGG 1297 Query 505 ----TGAGG-------GTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 ||| | | ||||||| | || ||| | ||| || | ||| Sbjct 1298 TTTTTGAAGCCGTACGGCGCACCATAGCCCCGTCCCCGTTGCTTGCAATAGGGCGGAGGT 1357 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| | | ||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct 1358 AGAGCGCATACGCTGGTACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGA 1417 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 ||||||||||||||| | || |||||||||| ||||||||||||||||| | |||||| Sbjct 1418 GGAAACTCTGGTGGAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGT 1477 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 1478 ATAGGGGCGA 1487 >seq3101 Length=397525 Score = 156 bits (172), Expect = 2e-35 Identities = 217/305 (71%), Gaps = 33/305 (11%) Strand=Plus/Plus Query 411 GTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGT 470 |||||| |||||||||||||||||| | ||| | |||||| ||||||| ||||| Sbjct 360362 GTCTTGAAACACGGACCAAGGAGTCCAGCATATGCGCGAGTCATTGGGTGATAAACCTAA 360421 Query 471 GCGCGTAATGAAAGTGAACG----------------GAGGTGGGAACC---CG-----TG 506 ||||||||||||| || | || ||||| || || || Sbjct 360422 AGGCGTAATGAAAGTAAAAGTCGCCCCGATGCGACCGATATGGGATCCATGCGATTTTTG 360481 Query 507 AGGGTGCAC-------CATCGACCGATCCT-GATGTCTTCGGATGGATTTGAGTAAGAGC 558 | | ||||| ||| | || ||| | || || | || | | ||| ||||| Sbjct 360482 AAGCTGCACGGCGCATCATAGCCCCGTCCACGTTGCCTGCA-ATAGGGTGGAGGTAGAGC 360540 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 || || ||||||||||||||||||||||||||||||| || ||||||| ||||||| Sbjct 360541 GTATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGAATGAAGCCCGAGGAAA 360600 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||| | || |||||||||| |||||||||||||||| | ||||||||||| Sbjct 360601 CTCTGGTGGAAGTCCGAAGCGGTTCTGATGTGCAAATCGATCGTCTGACTTGGGTATAGG 360660 Query 679 GGCGA 683 ||||| Sbjct 360661 GGCGA 360665 >seq2570 Length=98064 Score = 152 bits (168), Expect = 2e-34 Identities = 104/117 (89%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 93927 TGGTACCCGGAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGAGGAAACTCTGGTG 93986 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | || |||||||||| ||||||||||||||||| | |||||||||||||||| Sbjct 93987 GAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCGA 94043 >seq86 Length=170414 Score = 145 bits (160), Expect = 3e-32 Identities = 98/110 (89%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633 |||||||||||||||||||||||| || ||||||||||||||||||||||||| | | Sbjct 62624 CGAAAGATGGTGAACTATGCCTGAGCAGAATGAAGCCAGAGGAAACTCTGGTGGAAGTCC 62683 Query 634 GCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | |||||||||| ||||||||||||||||| | |||||||||||||||| Sbjct 62684 GAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGGTATAGGGGCGA 62733 >seq1508 Length=14854 Score = 141 bits (156), Expect = 4e-31 Identities = 101/116 (87%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| Sbjct 9098 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGATGAAGCCAGAGGAAATTCTGGTG 9039 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 || | || |||||||||| ||||||||||||||||| | |||| || || |||| Sbjct 9038 GAAGTCCGAAGCGGTTCTGACGTGCAAATCGATCGTCTGACTTGGTTACAGTGGCG 8983 >seq888 Length=126278 Score = 122 bits (134), Expect = 4e-25 Identities = 97/117 (83%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||| || |||||||||||||||||||||||| || ||| ||| ||||||| | ||||| Sbjct 122356 TGGCACTCGAAAGATGGTGAACTATGCCTGAGCAGTATGAGGCCGGAGGAAAATTTGGTG 122415 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || | | ||||||||||||||||| ||||||| || | |||||||||||||||| Sbjct 122416 GAAGTCTGAAGCGGTTCTGGCGTGCAGATCGATCCTCTGACTTGGGTATAGGGGCGA 122472 Score = 82.4 bits (90), Expect = 3e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 401 TAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG 460 || ||| ||||||||| |||||||||||||||||||| ||| | |||||| |||||| Sbjct 122159 TATGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCGAGTCAGTGGGTG 122218 Query 461 TCAAACCCGTGCGCGTAATGAAAGT 485 ||||| | ||||||||||||| Sbjct 122219 ATAAACCTGAAGGCGTAATGAAAGT 122243 >seq2390 Length=1158689 Score = 75.2 bits (82), Expect = 5e-11 Identities = 67/84 (80%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAA 464 || ||||||||| |||||||||||||||||||| ||| | || ||| ||||||| || Sbjct 490773 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAGCATATGCGCAAGTCATTGGGTGATAA 490832 Query 465 ACCCGTGCGCGTAATGAAAGTGAA 488 ||| ||||||||||||| || Sbjct 490833 ACCTAAAGGCGTAATGAAAGTAAA 490856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079509717350