Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3101 241 2e-61 seq3054 241 2e-61 seq2977 241 2e-61 seq1303 241 2e-61 seq1071 241 2e-61 seq761 205 1e-50 seq1508 77.0 5e-12 >seq3101 Length=397525 Score = 241 bits (266), Expect = 2e-61 Identities = 202/243 (83%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 358268 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 358210 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC-CAACCATAGTCG 135 | |||| ||||| | || | |||||||||||||| | || | || || Sbjct 358209 A-CTTCATGCGGCTGAACACCGCTTGTCCCTCTAAGAAGTCTTCCGGACTTGTTTATCCG 358151 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||| |||||||| ||| || |||||| ||||||||||||| |||||||||||||||| Sbjct 358150 ATGA--CTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACT 358093 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| Sbjct 358092 CCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCT 358033 Query 256 GTC 258 ||| Sbjct 358032 GTC 358030 >seq3054 Length=284887 Score = 241 bits (266), Expect = 2e-61 Identities = 202/243 (83%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 66321 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 66379 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC-CAACCATAGTCG 135 | |||| ||||| | || | |||||||||||||| | || | || || Sbjct 66380 A-CTTCATGCGGCTGAACACCGCTTGTCCCTCTAAGAAGTCTTCCGGACTTGTTTATCCG 66438 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||| |||||||| ||| || |||||| ||||||||||||| |||||||||||||||| Sbjct 66439 ATGA--CTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACT 66496 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| Sbjct 66497 CCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCT 66556 Query 256 GTC 258 ||| Sbjct 66557 GTC 66559 >seq2977 Length=81633 Score = 241 bits (266), Expect = 2e-61 Identities = 202/243 (83%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 17842 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 17784 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC-CAACCATAGTCG 135 | |||| ||||| | || | |||||||||||||| | || | || || Sbjct 17783 A-CTTCATGCGGCTGAACACCGCTTGTCCCTCTAAGAAGTCTTCCGGACTTGTTTATCCG 17725 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||| |||||||| ||| || |||||| ||||||||||||| |||||||||||||||| Sbjct 17724 ATGA--CTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACT 17667 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| Sbjct 17666 CCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCT 17607 Query 256 GTC 258 ||| Sbjct 17606 GTC 17604 >seq1303 Length=4005 Score = 241 bits (266), Expect = 2e-61 Identities = 202/243 (83%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 2167 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 2109 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC-CAACCATAGTCG 135 | |||| ||||| | || | |||||||||||||| | || | || || Sbjct 2108 A-CTTCATGCGGCTGAACACCGCTTGTCCCTCTAAGAAGTCTTCCGGACTTGTTTATCCG 2050 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||| |||||||| ||| || |||||| ||||||||||||| |||||||||||||||| Sbjct 2049 ATGA--CTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACT 1992 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| Sbjct 1991 CCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCT 1932 Query 256 GTC 258 ||| Sbjct 1931 GTC 1929 >seq1071 Length=5615 Score = 241 bits (266), Expect = 2e-61 Identities = 202/243 (83%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||| Sbjct 1200 CAGTGTAGCGCGCGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 1258 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC-CAACCATAGTCG 135 | |||| ||||| | || | |||||||||||||| | || | || || Sbjct 1259 A-CTTCATGCGGCTGAACACCGCTTGTCCCTCTAAGAAGTCTTCCGGACTTGTTTATCCG 1317 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 ||| |||||||| ||| || |||||| ||||||||||||| |||||||||||||||| Sbjct 1318 ATGA--CTATTTAGTAGGCTAGAGTCTCGCTCGTTATCGGAATAAACCAGACAAATCACT 1375 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| Sbjct 1376 CCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCT 1435 Query 256 GTC 258 ||| Sbjct 1436 GTC 1438 >seq761 Length=893878 Score = 205 bits (226), Expect = 1e-50 Identities = 196/244 (80%), Gaps = 8/244 (3%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| | ||| ||||||||||||||||||||||||||| ||| Sbjct 186534 CAGTGTAGCGCGCGTGCAGCCCTGGACAACTAAGGGCATCACAGACCTGTTATTGC-TCA 186592 Query 77 AACTTCCATT-GGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCAT-AGTC 134 | || ||| ||||| | || | |||| ||||||||| | || | | | Sbjct 186593 ACCT--CATGCGGCTGAACACCGCTTGTCCTTCTAAGAAGTCTTCCGGATTTGTTTACCC 186650 Query 135 GATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCAC 194 |||| |||||||| ||| || |||||| |||| |||||||| ||||||||||||||| Sbjct 186651 GATGA--CTATTTAGTAGGCTAGAGTCTCGCTCGTCATCGGAATAAACCAGACAAATCAC 186708 Query 195 TCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATC 254 ||||||||||||||||||||||||||||||| ||| | |||||||||||| | ||||| Sbjct 186709 TCCACCAACTAAGAACGGCCATGCACCACCAACCACCGGATCAAGAAAGAG-TCTCAATA 186767 Query 255 TGTC 258 |||| Sbjct 186768 TGTC 186771 >seq1508 Length=14854 Score = 77.0 bits (84), Expect = 5e-12 Identities = 78/99 (79%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||||||| ||| ||| | |||||||||||||||||||||||||||||| ||| Sbjct 11573 CAATGTAGCGCGCATGCAGCCTTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC- 11630 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| ||||| | ||| | | ||||| ||||| Sbjct 11631 AACTTTATGCGGCTGAACACCACTTATTCCTCTCAGAAG 11669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796623566817