Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq3054 84.2 3e-14 seq1303 84.2 3e-14 seq3101 75.2 1e-11 seq1071 75.2 1e-11 >seq3054 Length=284887 Score = 84.2 bits (92), Expect = 3e-14 Identities = 78/98 (80%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||||||||||||||| |||||| | | Sbjct 66949 AAACCAACAAAATAGAACCG-AGATCCTATTCTATTATTCCATGCACGAGTATTCAGACA 67007 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||| || | | |||||||||||| |||| ||||| Sbjct 67008 TAAGCCCGCGTGAAGCACTCTAATTTTTTCAAAGTAAA 67045 >seq1303 Length=4005 Score = 84.2 bits (92), Expect = 3e-14 Identities = 78/98 (80%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||||||||||||||| |||||| | | Sbjct 1539 AAACCAACAAAATAGAACCG-AGATCCTATTCTATTATTCCATGCACGAGTATTCAGACA 1481 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||| || | | |||||||||||| |||| ||||| Sbjct 1480 TAAGCCCGCGTGAAGCACTCTAATTTTTTCAAAGTAAA 1443 >seq3101 Length=397525 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||||||||||||||| |||||| | | Sbjct 357640 AAACCAACAAAATAGAACCG-AGATCCTATTCTATTATTCCATGCACGAGTATTCAGACA 357582 Query 70 TAAGCCTGCTTTGAACACTCTAATTT-TCTCAAGGTAA 106 |||||| || | | ||||||||||| | |||| |||| Sbjct 357581 TAAGCCCGCGTGAAGCACTCTAATTTATTTCAAAGTAA 357544 >seq1071 Length=5615 Score = 75.2 bits (82), Expect = 1e-11 Identities = 76/98 (78%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | |||||||| ||||||||||| |||||| | | Sbjct 1815 AAACCAACAAAATAGAATCG-AGACCCTATTCTGTTATTCCATGCACGAGTATTCAGACA 1873 Query 70 TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||| || | | |||||||||||| |||| ||||| Sbjct 1874 TAAGCCCGCGTGAAGCACTCTAATTTTTTCAAAGTAAA 1911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595068206538