Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_032131.1 Length=1523 Score E Sequences producing significant alignments: (Bits) Value seq2916 396 3e-107 >seq2916 Length=843511 Score = 396 bits (438), Expect = 3e-107 Identities = 771/1109 (70%), Gaps = 40/1109 (4%) Strand=Plus/Plus Query 428 GAATCATTCACAGTTCAAGCTATCTCGATGTCTCATCTAGACGCGGTTTCTTTCGTTGGA 487 || |||||| |||| | || ||||||||| || || ||| ||| || | | ||| Sbjct 465247 GATTCATTCTCAGTGGACGCCATCTCGATGAGCCAACTCGACAAGGTATCGTATATCGGA 465306 Query 488 TCTTCGGCTGCCGGTTATGGATATGTCGGAAACAAACGCGACAACTATCTTGTCGCACGA 547 || || || ||||| | |||||| || || || || || |||||||| |||| || Sbjct 465307 TCATCCGCAGCCGGATTTGGATACGTGGGCCTGAAGCGTGATAACTATCTGATCGCTCGT 465366 Query 548 GGACACGCTACGAGCAACCTTGCCAACTTCAGACGTTGGGGTAGTAAGCTTCGGCTTACG 607 | || || || ||||||||||||||| | |||||||| | | | ||||| | || Sbjct 465367 GCGCATGCGACCTCCAACCTTGCCAACTTTAATCGTTGGGGCACTGAATTTCGGTTCACT 465426 Query 608 CCTTACAAGGCCTACTCCCGTACGCAACTTGCGCTAAGAGCGGATCCGAAAATCCGTCAC 667 || |||||||| | || |||||||| | || |||| || || |||||| | || ||| Sbjct 465427 CCATACAAGGCGTTTTCGTGTACGCAATTAGCCTTAAGGGCCGACCCGAAAGTTCGGCAC 465486 Query 668 GTGTGGGGAGCGCCCTTCCACACGATCTTAATTGAGGGTACCATCGCTCAACCGATCATA 727 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||| || || Sbjct 465487 GTGTGGGGAGCTCCTTTCCACACAATCTTAATCGAGGGTACCATCGCCCAACCAATTATT 465546 Query 728 GTAAACCTGCAACTATACGATCAACCTATCTACATCGGAAAGGATATGTTCAAAGAACTT 787 ||||||||||| | | ||||| || | ||| |||| || ||||| ||||||||| Sbjct 465547 CAGAACCTGCAACTGAAAAACCAACCGATATTCATTGGAAGAGACATGTTTAAAGAACTT 465606 Query 788 CCTTATACGCTGAATCGACTACTTCGTGATAACTTTTTCGCTTATTGTATTGATATCAGT 847 || || | |||| | | || || || | || |||||| | ||| | | Sbjct 465607 CCCGCGACCATCCATCGTATGATGCGCGACGACAACTATGCATATTGTGTAGATTTGTCT 465666 Query 848 GCTTTCGATTCATCTGTAAATCAGAT-CTTTATCGATTGGTTCTTCGACTTTGT---CTC 903 |||| || || |||||||| | || ||||| || || |||||||||||||| || Sbjct 465667 TCTTTTGACTCTTCTGTAAA-CGTATGGTTTATTGAATGTTTCTTCGACTTTGTAAAGTC 465725 Query 904 TAAAACAGTCACCTTTCCTAACGCTTTCACTCGATCAGCAGTCGACTACTGCCGATTCGA 963 | || || ||||| || ||| || ||||||||| ||| || || || Sbjct 465726 T---ACCGTTCGTTTTCCGAATATCTTCTCTTCATCAGCAGTTAGCTATTGTCGTGAAGA 465782 Query 964 ACTGAAACACACACCTGTTGTAATGCCAGACGGTAAGATGTACATCTGCCACACCGGTAT 1023 | | | || || ||||| |||||||| || || | |||||||| || ||| | Sbjct 465783 GTTAATCAATACGCCAGTTGTTATGCCAGATGGCAAACTTTACATCTGTAGAACAGGTGT 465842 Query 1024 ACCGAGTGGCTCGTACTTTACTCAGCTTATCGATTCCTATGTGAACCTGATAATGCTTCG 1083 ||| || || ||||| || || ||| | |||||||| ||||||||| |||| | ||||| Sbjct 465843 ACCAAGCGGTTCGTATTTCACACAGATGATCGATTCGTATGTGAACTTGATTCTTCTTCG 465902 Query 1084 TGCTTGTCAGCTTT-CCATTCTCGAGTCAGTCGTTCCGACCTACGTACTTGGCGACGACT 1142 |||| || |||| ||||| | || || | || |||||||| | || ||||| | Sbjct 465903 TGCTGCACAACTTTACCATTGT-GAACGTGTACTACCAACCTACGTGTTGGGAGACGATT 465961 Query 1143 CGATCTTCTGTCACCACAACCCTAACCATCTCGAATCTTTTCGAG-TCCTTTTCGAAGAG 1201 || | ||| | ||| | | ||||| | || | || ||||| | |||||| | Sbjct 465962 CGTTGTTCGTTTACCGCGATCCTAATCTGCTTG-ATGAACTCGAGAACTTTTTCGCGAAA 466020 Query 1202 TTCGGTTTCAAACTGAACGTTCGAAAGA---CCATCGTTTCGAAGAGTTCC-CAAGAGAT 1257 ||| |||| ||||| |||||| ||||||| || || || ||| |||||| Sbjct 466021 TTCAATTTCGTGATGAAC---AGAAAGAAGTCCATCGTGTCCAA-AGATCCGGGAGAGAT 466076 Query 1258 TGTGTTCCTTGGACACAACTTCTACGGTTCTCGACTAACTCGAGACGACTTCACACTCGC 1317 | | || ||||| |||||||| ||||||||||||||||| || ||||||||||| || || Sbjct 466077 TATCTTTCTTGGTCACAACTTTTACGGTTCTCGACTAACCCGTGACGACTTCACGCTTGC 466136 Query 1318 TTGTCTTGCAATCCACACTG-AGACTCCAATTGTTAACA---GTT--CTCAGACTGTTGT 1371 ||||| || ||||||||| |||| ||| || |||| | | |||| || | | Sbjct 466137 GTGTCTAGCCGTCCACACTGAAGAC-CCAGTT-ACAACACCCGATGAATCAG--TGAT-T 466191 Query 1372 CAGACTCGCTTCTTTGCTGTACGACAGTGGTCACAATTCTTTCTTTCTAATGAATTT-GT 1430 | | || || ||| |||| |||||||| | ||||| |||||||| ||||||| | Sbjct 466192 C-GTCTTTGCTCGTTGTTGTATGACAGTGGATATAATTCGTTCTTTCTTTTGAATTTAAT 466250 Query 1431 TA--ACTGCTGCTATCAAGAGGTACGGCTCACCCCGTCCCCTT-CATCCACCGTACGTGC 1487 || | || ||| || |||||| || || | | || |||| || || |||| Sbjct 466251 TAAGAAAGCGTCTA-CA--TTGTACGG-TCTTCCTGAACGTTTGCATCACCCCTATGTGC 466306 Query 1488 AATTGTTTATGTTGAGTTGAAATGAAATA 1516 ||||||| ||||| |||||||| || || Sbjct 466307 AATTGTTCTTGTTGGGTTGAAATAAATTA 466335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4763642841518