Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20nelsoni_20[genbank_20GCA_5F001447455.1_202015-11-24] 2,969 sequences; 47,436,005 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1533 82.4 9e-14 >seq1533 Length=12210 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | || |||||||||||||||||| ||||| ||| Sbjct 8924 AAACCAACAAAATAGAACCG-AGATCGTATTCTATTATTCCATGCACCATTATTCAGGCA 8982 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108 | | |||||||||| |||||||||||| |||| |||||| Sbjct 8983 TCACAACCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAAA 9023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595182880746