Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20papuae_20[genbank_20GCA_5F001447755.1_202015-11-24] 2,542 sequences; 46,844,510 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq843 102 1e-19 >seq843 Length=82383 Score = 102 bits (112), Expect = 1e-19 Identities = 92/113 (81%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||||| || |||| | |||||| |||| | |||| | | || Sbjct 30673 GTACGAGAGGAACCGCGGGAT-CAGAC-ATTTGGTTCATGCGCTCGGCTGAAAGGCCGGT 30730 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | |||||||||| ||||||| ||||||| ||||||||||||||||||||||| Sbjct 30731 GGCGCGAAGCTAGCATCTGCAAGATTATGACTGAACGCCTCTAAGTCAGAATC 30783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819179826688