Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20pseudospiralis_20[genbank_20GCA_5F001447645.1_202015- 11-24] 6,594 sequences; 49,152,658 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq204 82.4 9e-14 >seq204 Length=34226 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | || |||||||||||||||||| ||||| ||| Sbjct 2000 AAACCAACAAAATAGAACCG-AGATCGTATTCTATTATTCCATGCACCATTATTCAGGCA 1942 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108 | | |||||||||| |||||||||||| |||| |||||| Sbjct 1941 TCACAACCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAAA 1901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595161978996