Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20sp._20T8_20[genbank_20GCA_5F001447745.1_202015-11-24] 4,124 sequences; 49,331,761 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1636 459 9e-127 seq3535 286 1e-74 seq2876 271 2e-70 seq4023 259 2e-66 seq4008 259 2e-66 seq3885 259 2e-66 seq3884 259 2e-66 seq3572 259 2e-66 seq3489 259 2e-66 seq156 259 2e-66 seq3939 251 2e-64 seq3483 239 1e-60 seq3880 170 6e-40 seq3630 145 2e-32 seq3618 145 2e-32 seq1919 131 5e-28 seq3576 104 8e-20 seq628 93.3 1e-16 >seq1636 Length=36320 Score = 459 bits (508), Expect = 9e-127 Identities = 280/297 (94%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| |||||||| ||| ||| |||||| |||| |||||||||||||||||| Sbjct 23318 CTCCCACCTATGCTACACCTTTCATGTCTCTTCACAGAGTCAGACTAGAGTCAAGCTCAA 23259 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 23258 CAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 23199 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||| Sbjct 23198 ATAGTAGATAGGGACAGAAGGAATCTTGTTGATCCATTCATACGCGTCACTAATTAGATG 23139 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23138 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGA 23079 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 23078 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCATCA 23022 Score = 170 bits (188), Expect = 6e-40 Identities = 97/99 (98%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 25479 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTGAATTTCTTCACTTTG 25420 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||| || Sbjct 25419 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCATCA 25381 Score = 107 bits (118), Expect = 6e-21 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 9 TTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGT 68 ||| ||||| ||| ||||||| ||| |||| |||||||||||||||||||| || Sbjct 23700 TTTACTCTAAGCGAGGTTTCTGTCCTCGCTGAGCTTACCTTAGGACACCTGCGTTATCGT 23641 Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 ||||||||||| ||||||||| |||||||||| |||||| ||| Sbjct 23640 TTAACAGATGTACCGCCCCAGTCAAACTCCCCGTCTGACACTGT 23597 >seq3535 Length=3263 Score = 286 bits (316), Expect = 1e-74 Identities = 181/196 (92%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| |||||||| ||| ||| |||||| |||| |||||||||||||||||| Sbjct 482 CTCCCACCTATGCTACACCTTTCATGTCTCTTCACAGAGTCAGACTAGAGTCAAGCTCAA 541 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 542 CAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 601 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||| Sbjct 602 ATAGTAGATAGGGACAGAAGGAATCTTGTTGATCCATTCATACGCGTCACTAATTAGATG 661 Query 417 ACGAGGCATTTGGCTA 432 |||||||||||||||| Sbjct 662 ACGAGGCATTTGGCTA 677 Score = 107 bits (118), Expect = 6e-21 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 9 TTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGT 68 ||| ||||| ||| ||||||| ||| |||| |||||||||||||||||||| || Sbjct 100 TTTACTCTAAGCGAGGTTTCTGTCCTCGCTGAGCTTACCTTAGGACACCTGCGTTATCGT 159 Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 ||||||||||| ||||||||| |||||||||| |||||| ||| Sbjct 160 TTAACAGATGTACCGCCCCAGTCAAACTCCCCGTCTGACACTGT 203 >seq2876 Length=330856 Score = 271 bits (300), Expect = 2e-70 Identities = 180/200 (90%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||| ||| |||||||| ||| ||| |||||| |||| |||||||||||||||||| Sbjct 326853 CTCCCACCTATGCTACACCTTTCATGTCTCTTCACAGAGTCAGACTAGAGTCAAGCTCAA 326912 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 326913 CAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTACGCTAG 326972 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||| |||| ||||||| ||| |||||||||| |||||||||||||||||| Sbjct 326973 ATAGTAGATAGGAACAGAAGGAATCTTGTTGATCCATTCATACGCGTCACTAATTAGATG 327032 Query 417 ACGAGGCATTTGGCTACCTT 436 ||| ||| ||||||||| || Sbjct 327033 ACGGGGCCTTTGGCTACATT 327052 Score = 260 bits (288), Expect = 5e-67 Identities = 180/203 (89%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCAT---TTCACAAAGTCGGACTAGAGTCAAGCT 293 ||||||| ||| |||||||| ||| ||| | |||||| |||| ||||||||||||||| Sbjct 316655 CTCCCACCTATGCTACACCTTTCATGTCTTCTCTTCACAGAGTCAGACTAGAGTCAAGCT 316596 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 316595 CAACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTACGC 316536 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||||||||| Sbjct 316535 TAGATAGTAGATAGTCACAGAAGGAATCTTGTTGATCCATTCATACGCGTCACTAATTAG 316476 Query 414 ATGACGAGGCATTTGGCTACCTT 436 |||||| ||| ||||||||| || Sbjct 316475 ATGACGGGGCCTTTGGCTACATT 316453 Score = 107 bits (118), Expect = 6e-21 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 9 TTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGT 68 ||| ||||| ||| ||||||| ||| |||| |||||||||||||||||||| || Sbjct 326471 TTTACTCTAAGCGAGGTTTCTGTCCTCGCTGAGCTTACCTTAGGACACCTGCGTTATCGT 326530 Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 ||||||||||| ||||||||| |||||||||| |||||| ||| Sbjct 326531 TTAACAGATGTACCGCCCCAGTCAAACTCCCCGTCTGACACTGT 326574 Score = 93.3 bits (102), Expect = 1e-16 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 9 TTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGT 68 ||| ||||| ||| ||||||| | | |||| ||||||||||||||| |||| || Sbjct 317037 TTTACTCTAAGCGAGGTTTCTGTCCCCGCTGAGCTTACCTTAGGACACCTGCATTATCGT 316978 Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC 107 ||||||||||| ||||||||| |||||||||| ||||| Sbjct 316977 TTAACAGATGTACCGCCCCAGTCAAACTCCCCGTCTGAC 316939 >seq4023 Length=879 Score = 259 bits (286), Expect = 2e-66 Identities = 157/166 (95%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 TTCACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCA 60 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 61 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTTGTT 120 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 121 GATCCATTCATACGCGTCACTAATTAGATGACGAGGCATTTGGCTA 166 >seq4008 Length=905 Score = 259 bits (286), Expect = 2e-66 Identities = 157/166 (95%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 TTCACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCA 60 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 61 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTTGTT 120 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 121 GATCCATTCATACGCGTCACTAATTAGATGACGAGGCATTTGGCTA 166 >seq3885 Length=1115 Score = 259 bits (286), Expect = 2e-66 Identities = 157/166 (95%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 TTCACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCA 60 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 61 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTTGTT 120 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 121 GATCCATTCATACGCGTCACTAATTAGATGACGAGGCATTTGGCTA 166 >seq3884 Length=1116 Score = 259 bits (286), Expect = 2e-66 Identities = 157/166 (95%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 TTCACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCA 60 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 61 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTTGTT 120 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 121 GATCCATTCATACGCGTCACTAATTAGATGACGAGGCATTTGGCTA 166 >seq3572 Length=2749 Score = 259 bits (286), Expect = 2e-66 Identities = 157/166 (95%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2749 TTCACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCA 2690 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 2689 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTTGTT 2630 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2629 GATCCATTCATACGCGTCACTAATTAGATGACGAGGCATTTGGCTA 2584 >seq3489 Length=4001 Score = 259 bits (286), Expect = 2e-66 Identities = 157/166 (95%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 TTCACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCA 60 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 61 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTTGTT 120 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 121 GATCCATTCATACGCGTCACTAATTAGATGACGAGGCATTTGGCTA 166 >seq156 Length=627 Score = 259 bits (286), Expect = 2e-66 Identities = 157/166 (95%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 TTCACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCA 60 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 61 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTTGTT 120 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 121 GATCCATTCATACGCGTCACTAATTAGATGACGAGGCATTTGGCTA 166 >seq3939 Length=1029 Score = 251 bits (278), Expect = 2e-64 Identities = 153/162 (94%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 271 CAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCC 330 || |||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1025 CAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCC 966 Query 331 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC 390 ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||| Sbjct 965 CGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTTGTTGATC 906 Query 391 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||| |||||||||||||||||||||||||||||||||| Sbjct 905 CATTCATACGCGTCACTAATTAGATGACGAGGCATTTGGCTA 864 >seq3483 Length=4189 Score = 239 bits (264), Expect = 1e-60 Identities = 155/170 (91%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 |||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 4189 TTCACAGAGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCA 4130 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||| Sbjct 4129 AGCCCGTTCCCTTGGCTGTGGTTACGCTAGATAGTAGATAGTCACAGAAGGAATCTTGTT 4070 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 436 |||||||||| ||||||||||||||||||||| ||| ||||||||| || Sbjct 4069 GATCCATTCATACGCGTCACTAATTAGATGACGGGGCCTTTGGCTACATT 4020 >seq3880 Length=203684 Score = 170 bits (188), Expect = 6e-40 Identities = 97/99 (98%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 166804 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTGAATTTCTTCACTTTG 166745 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||| || Sbjct 166744 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCATCA 166706 >seq3630 Length=2180 Score = 145 bits (160), Expect = 2e-32 Identities = 82/83 (99%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2098 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTGAATTTCTTCACTTTGAC 2157 Query 497 ATTCAGAGCACTGGGCAGAAATC 519 ||||||||||||||||||||||| Sbjct 2158 ATTCAGAGCACTGGGCAGAAATC 2180 >seq3618 Length=2296 Score = 145 bits (160), Expect = 2e-32 Identities = 82/83 (99%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 83 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTGAATTTCTTCACTTTGAC 24 Query 497 ATTCAGAGCACTGGGCAGAAATC 519 ||||||||||||||||||||||| Sbjct 23 ATTCAGAGCACTGGGCAGAAATC 1 >seq1919 Length=327 Score = 131 bits (144), Expect = 5e-28 Identities = 75/77 (97%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 457 CGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 516 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 245 CGCCGTTTACCCGCGCTTGATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAA 304 Query 517 ATCACATTGCGTCAACA 533 |||||||||||||| || Sbjct 305 ATCACATTGCGTCATCA 321 >seq3576 Length=2679 Score = 104 bits (114), Expect = 8e-20 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 60 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTGAATTTCTTCACTTTGAC 1 >seq628 Length=461 Score = 93.3 bits (102), Expect = 1e-16 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 9 TTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGT 68 ||| ||||| ||| ||||||| | | |||| ||||||||||||||| |||| || Sbjct 223 TTTACTCTAAGCGAGGTTTCTGTCCCCGCTGAGCTTACCTTAGGACACCTGCATTATCGT 282 Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGAC 107 ||||||||||| ||||||||| |||||||||| ||||| Sbjct 283 TTAACAGATGTACCGCCCCAGTCAAACTCCCCGTCTGAC 321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635132564352