Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20zimbabwensis_20[genbank_20GCA_5F001447665.1_202015-11- 24] 10,839 sequences; 50,795,114 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq839 78.8 2e-12 >seq839 Length=1086 Score = 78.8 bits (86), Expect = 2e-12 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT-TTTCGCCTTTCCCTCACGG 328 ||||||||| | ||| || |||| | ||| | ||||||| |||| ||||||||||||| Sbjct 450 ACGGTTTCACGTTCTCTTGAACTCTC-TCTACAGGGTTCTGTTTCAACTTTCCCTCACGG 392 Query 329 TACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 |||| |||| ||||||||| || ||||||||||| || Sbjct 391 TACTTGTTCGCTATCGGTCTCGTGGTCATATTTAGCCTTAGA 350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241465422976