Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20muris_20[genbank_20GCA_5F000612645.1_202014-03-26] 1,683 sequences; 84,405,302 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq568 78.8 9e-13 >seq568 Length=2932 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| || ||| ||||||| ||||||||||||||||| ||||| ||| Sbjct 2519 GGTGGATGCCTTGGCACTGAGAGCCGAAGAAAGACGTGATAAGCTGCGATAAGCTGCGGC 2460 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACC 113 | ||| ||| | | ||| |||| || |||||||| |||| Sbjct 2459 AAGGAGCAAATATCCTATAACCCGCAGATTTCTGAATGGGGAAACC 2414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476792226223