Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20muris_20[genbank_20GCA_5F000612645.1_202014-03-26]
1,683 sequences; 84,405,302 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq568 109 6e-22
>seq568
Length=2932
Score = 109 bits (120), Expect = 6e-22
Identities = 130/175 (74%), Gaps = 5/175 (3%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
|| |||| |||||| || | | | || || ||||||| | | ||| || ||||
Sbjct 883 CGTAAACCGACACAGGTGGATGAGGAGAGAATCCTAAGGCCGGCGGGAGAAGCATTGTTA 824
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||||| |||||| || ||| ||||||| |||| || |||| ||| | |||| ||
Sbjct 823 AGGAACTCGGCAAAATGGCCCCGTAACTTAGGGAGAAGGGGTGCCT-CTGAGAA----GA 769
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||||||| ||| || ||||||||||| |||||||||||| || ||| ||
Sbjct 768 GGCCGCAGAGAAAAGGCTCAAGCAACTGTTTAGCAAAAACACAGGTCTATGCGAA 714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531191339282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |