Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20muris_20[genbank_20GCA_5F000612645.1_202014-03-26] 1,683 sequences; 84,405,302 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq568 82.4 7e-14 >seq568 Length=2932 Score = 82.4 bits (90), Expect = 7e-14 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 || |||||||| |||||||||| || ||| || |||||| || ||||| || ||| Sbjct 747 GCAACTGTTTAGCAAAAACACAGGTCTATGCGAAACCGAAAGGTGAAGTATATGGGCTGA 688 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||||||||||| |||||||||| Sbjct 687 CGCCTGCCCGGTGCTGGAAGGTTAA 663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476792226223