Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20muris_20[genbank_20GCA_5F000612645.1_202014-03-26]
1,683 sequences; 84,405,302 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq568 421 1e-115
>seq568
Length=2932
Score = 421 bits (466), Expect = 1e-115
Identities = 313/364 (86%), Gaps = 3/364 (1%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
|| || |||||||||| || | | ||||||||||| | ||||||||||||| || |||
Sbjct 477 TAGCCAGCATCTTCACTGGCACTTCAATTTCACCGGGGGCATTGTTGAGACAGCGCTCAA 536
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 ATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 596
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
|||||||||||||||||||||||||| ||||||| | |||| |||||| || || ||
Sbjct 597 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAAAGCTTCGTTT--CCTGAC 654
Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240
||| ||||||||||||||||||||||||||||||| | ||||| || ||| || |
Sbjct 655 TTCTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCATATACTTCACCTTTCGGTT 714
Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300
| ||| | ||||||||||||| |||||||| ||||| |||| ||||||||||||| | |
Sbjct 715 TCGCATAGACCTGTGTTTTTGCTAAACAGTTGCTTGAGCCTTTTCTCTGCGGCCTCTTCT 774
Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGT 360
| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 775 -CAGAGGCACCCCTTCTCCCTAAGTTACGGGGCCATTTTGCCGAGTTCCTTAACAATGCT 833
Query 361 TCTC 364
||||
Sbjct 834 TCTC 837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062382119808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |