Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20muris_20[genbank_20GCA_5F000612645.1_202014-03-26]
1,683 sequences; 84,405,302 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq568 132 5e-29
>seq568
Length=2932
Score = 132 bits (146), Expect = 5e-29
Identities = 117/150 (78%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83
||||||||| ||||| ||| |||| | |||||||||| | ||| ||||||||| |
Sbjct 453 GGGGTCTTTCCGTCCTGGCGCAGGTAGCCAGCATCTTCACTGGCACTTCAATTTCACCGG 512
Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| || |||||||||| ||| || ||||||| ||||||||||||||||
Sbjct 513 GGGCATTGTTGAGACAGCGCTCAAATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCG 572
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 573 ACAAGGAATTTCGCTACCTTAGGACCGTTA 602
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547191078417
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |