Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20muris_20[genbank_20GCA_5F000612645.1_202014-03-26]
1,683 sequences; 84,405,302 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq568 138 3e-30
>seq568
Length=2932
Score = 138 bits (152), Expect = 3e-30
Identities = 135/170 (79%), Gaps = 3/170 (2%)
Strand=Plus/Plus
Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309
|| |||| | ||||| || | ||||||||| ||| ||||||||||||| ||||||||||
Sbjct 1955 CTTCCACAGTTTGTAA-CACAGGGTTTCAGGTTCTCTTTCACTCCCCTC-CCGGGGTTCT 2012
Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369
|||| ||||||| |||| |||||| | | |||||||||| | ||||||||||||||||
Sbjct 2013 TTTCACCTTTCCTTCACAGTACTA-TACGCTATCGGTCACTGAGTAGTATTTAGCCTTAC 2071
Query 370 AGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
|| |||||||| | | ||| |||| ||| | |||| ||| |||||
Sbjct 2072 GGGGTGGTCCCCGCTTGTTCCCACAAGGTTCCACGTGTCTCGTGGTACTC 2121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241579103872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |