Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2742 356 4e-96 seq2596 356 4e-96 seq2155 356 4e-96 seq1905 356 4e-96 seq1873 356 4e-96 seq1861 356 4e-96 seq1839 356 4e-96 seq1782 356 4e-96 seq1930 351 2e-94 seq2729 342 9e-92 seq919 123 4e-26 seq2139 120 5e-25 seq3068 114 2e-23 seq408 100 5e-19 seq2838 87.8 3e-15 seq1599 87.8 3e-15 seq1870 82.4 1e-13 seq2532 73.4 7e-11 seq595 73.4 7e-11 >seq2742 Length=2201 Score = 356 bits (394), Expect = 4e-96 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 1771 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 1712 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 1711 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 1652 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1651 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1592 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 1591 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCA 1532 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 1531 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 1478 >seq2596 Length=2499 Score = 356 bits (394), Expect = 4e-96 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 1761 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 1702 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 1701 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 1642 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1641 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1582 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 1581 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCA 1522 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 1521 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 1468 >seq2155 Length=3733 Score = 356 bits (394), Expect = 4e-96 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 622 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 681 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 682 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 741 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 742 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 801 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 802 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCA 861 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 862 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 915 >seq1905 Length=4668 Score = 356 bits (394), Expect = 4e-96 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 4050 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 3991 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 3990 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 3931 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3930 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 3871 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 3870 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCA 3811 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 3810 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 3757 >seq1873 Length=4818 Score = 356 bits (394), Expect = 4e-96 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 3819 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 3760 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 3759 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 3700 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3699 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 3640 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 3639 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCA 3580 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 3579 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 3526 >seq1861 Length=4896 Score = 356 bits (394), Expect = 4e-96 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 4278 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 4219 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 4218 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 4159 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4158 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 4099 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 4098 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCA 4039 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 4038 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 3985 >seq1839 Length=5065 Score = 356 bits (394), Expect = 4e-96 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 3081 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 3022 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 3021 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 2962 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2961 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 2902 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 2901 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCA 2842 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 2841 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 2788 >seq1782 Length=5454 Score = 356 bits (394), Expect = 4e-96 Identities = 256/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 4852 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 4793 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 4792 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 4733 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4732 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 4673 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 4672 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCA 4613 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 4612 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 4559 >seq1930 Length=4564 Score = 351 bits (388), Expect = 2e-94 Identities = 255/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 3944 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 3885 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 3884 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGCG 3825 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3824 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 3765 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct 3764 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACCCCTCTTGCA 3705 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 3704 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 3651 >seq2729 Length=2227 Score = 342 bits (378), Expect = 9e-92 Identities = 253/294 (86%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGA-CGGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| | | ||| |||| ||||||||||||||||||||||||||| Sbjct 606 TACTGAGCAGGATTACTACAGCAACGATCGGTGATCAGTAGGGTAAAACTAACCTGTCTC 665 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 666 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACGCTTGGTG 725 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 726 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGGTG 785 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 786 TGGGCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCA 845 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | |||||||||||||||||| ||||| ||| | ||||| Sbjct 846 TTGAATCCGCAAAATCAAAAGGATCGATAGGCCACGCTTTCGCGGTCTCTATTC 899 >seq919 Length=17495 Score = 123 bits (136), Expect = 4e-26 Identities = 147/197 (75%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||||||||||||||| ||||||||||| ||| || ||| | ||| | |||| | | Sbjct 17207 CAGTAGGGTAAAACTGACCTGTCTCATTACGAACTGAACGTGGTTCATGGTCCCAGCTGG 17266 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||| ||| ||| | ||| | | || ||| || | | | |||| || |||||| Sbjct 17267 TGGCTGAGCAACCTAACTC--AACGGATTTTGGCCCACAAGAACCGGAATAGGCGACATT 17324 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||| |||| |||||| ||||| |||| |||||||||||||| ||||| ||||| | || Sbjct 17325 GAAGTATCACAAAGCAGCGTCGTTATGGACGCTTGGCTGCCA-AAGCCGGTTATTCACGT 17383 Query 215 GGTAACTTTTCTGGCAC 231 |||| |||||||| ||| Sbjct 17384 GGTATCTTTTCTGACAC 17400 >seq2139 Length=3771 Score = 120 bits (132), Expect = 5e-25 Identities = 146/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||||||||||||||| |||||| |||| ||| || ||| | ||| | |||| | | Sbjct 296 CAGTAGGGTAAAACTGACCTGTTTCATTACGAACTGAACGTGGTTCATGGTCCCAGCTGG 355 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||| ||| ||| | ||| | | || ||| || | | | |||| || |||||| Sbjct 356 TGGCTGAGCAACCTAACTC--AACGGATTTTGGCCCACAAGAACCGGAATAGGCGACATT 413 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||| |||| |||||| ||||| |||| |||||||||||||| ||||| ||||| | || Sbjct 414 GAAGAATCACAAAGCAGCGTCGTTATGGACGCTTGGCTGCCA-AAGCCGGTTATTCACGT 472 Query 215 GGTAACTTTTCTGGCAC 231 |||| |||||||| ||| Sbjct 473 GGTATCTTTTCTGACAC 489 >seq3068 Length=1716 Score = 114 bits (126), Expect = 2e-23 Identities = 145/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 ||||||||||||||| |||||| |||| ||| || ||| | ||| | |||| | | Sbjct 1496 CAGTAGGGTAAAACTGACCTGTTTCATTACGAACTGAACGTGGTTCATGGTCCCAGCTGG 1437 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 ||| ||| ||| | ||| | | || ||| || | | | ||| || |||||| Sbjct 1436 TGGCTGAGCAACCTAACTC--AACGGATTTTGGCCCACAAGAACCGGAGTAGGCGACATT 1379 Query 155 GAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGT 214 |||| |||| |||||| ||||| |||| |||||||||||||| ||||| ||||| | || Sbjct 1378 GAAGTATCACAAAGCAGCGTCGTTATGGACGCTTGGCTGCCA-AAGCCGGTTATTCACGT 1320 Query 215 GGTAACTTTTCTGGCAC 231 |||| |||||||| ||| Sbjct 1319 GGTATCTTTTCTGACAC 1303 >seq408 Length=49656 Score = 100 bits (110), Expect = 5e-19 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 49 TAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC 108 |||| | ||||| ||||| |||||||| ||| |||| |||| || |||||||||| Sbjct 40992 TAACTTTTCTCACGACGGGATAAACCCACTTCATGTTCTTTATTGAAGGATGAACAATCC 41051 Query 109 AACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAG 168 ||||||| | |||||| | || |||| ||||||||| |||| || ||| | |||| Sbjct 41052 AACGCTTGATGGATTCTGTTCCGCAATGACAGGAAGAGCTGACACTGACGGAAAAGAAAG 41111 Query 169 CAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 || | |||| || || ||||||||| | |||| ||| Sbjct 41112 CACTGGCGCTTCAAAAGCGTGGCTGCCATTAACCAGCTAT 41151 >seq2838 Length=2052 Score = 87.8 bits (96), Expect = 3e-15 Identities = 125/175 (71%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| | || ||||| | ||| Sbjct 1433 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCGCTTTAATTGGCGAACAGCCAAACC 1374 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||||||||| || | | ||| || ||||||||||||| | |||| | Sbjct 1373 CTTGGGACCGAATTCAGCCCCAGGATGC---GACGAGCCGACATCGAGGTGCCAAACCTC 1317 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||||| || |||||||| | | |||| |||||||| |||| ||||| Sbjct 1316 CCCGTCGCTGTGGACGCTTGGGGGAGATCAGCCTGTTATCCCCAGGGTAGCTTTT 1262 >seq1599 Length=6876 Score = 87.8 bits (96), Expect = 3e-15 Identities = 125/175 (71%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 5899 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACC 5840 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||||| | | || | | ||| || ||||||||||||| | |||| | Sbjct 5839 CTTGGGACCGACTACAGCCCCAGGATGC---GACGAGCCGACATCGAGGTGCCAAACCTC 5783 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | ||||| ||||| | | ||||| |||||||| |||| ||||| Sbjct 5782 CCCGTCGATGTGAACTCTTGGGGGAGATAAGCCTGTTATCCCCAGGGTAGCTTTT 5728 >seq1870 Length=4832 Score = 82.4 bits (90), Expect = 1e-13 Identities = 124/175 (71%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 1333 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACC 1392 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||||| | | || | | ||| || ||||||||||||| | |||| | Sbjct 1393 CTTGGGACCGACTACAGCCCCAGGATGC---GACGAGCCGACATCGAGGTGCCAAACCTC 1449 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | || || ||||| | | ||||| |||||||| |||| ||||| Sbjct 1450 CCCGTCGATGTGGACTCTTGGGGGAGATAAGCCTGTTATCCCCAGGGTAGCTTTT 1504 >seq2532 Length=2654 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| | || ||||| | ||| Sbjct 704 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTACCGCTTTAATTGGCGAACAGCCAAACC 645 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||||||| | || | | ||| || ||||||||||||| | |||| | Sbjct 644 CTTGGGACCGAATACAGCCCCAGGATGC---GATGAGCCGACATCGAGGTGCCAAACCTC 588 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | || || ||||| | | |||| |||||||| |||| ||||| Sbjct 587 CCCGTCGATGTGGACTCTTGGGGGAGATCAGCCTGTTATCCCCAGGGTAGCTTTT 533 >seq595 Length=34093 Score = 73.4 bits (80), Expect = 7e-11 Identities = 114/162 (70%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| || ||||| | || Sbjct 33930 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACC 33989 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | ||| || | | ||| || ||||||||||||| | |||| | | Sbjct 33990 CTTGGGACCTACTTCAGCCCCAGGATGT---GATGAGCCGACATCGAGGTGCCAAACACC 34046 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||||| ||||||| ||||| | | |||| |||||||| Sbjct 34047 GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCC 34088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854364491136