Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3462 87.8 3e-15 >seq3462 Length=1263 Score = 87.8 bits (96), Expect = 3e-15 Identities = 85/107 (79%), Gaps = 8/107 (7%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGCTC------AAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||||||||||||||| | || | | |||||| || | ||| |||||||||| Sbjct 177 GCTTCTTAGAGGGACCAGCGACACTTTCGCAAGCCGCACGA-GAAAGAG-CAATAACAGG 120 Query 125 TCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171 |||||||||||||||||||| | |||| ||||||| ||||||||||| Sbjct 119 TCTGTGATGCCCTTAGATGTACGGGGCTGCACGCGTGCTACACTGAC 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947160634368