Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3462 143 8e-32 >seq3462 Length=1263 Score = 143 bits (158), Expect = 8e-32 Identities = 94/104 (90%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||||||| |||| ||||||||||||| |||||||||||||| Sbjct 1160 TATTTTTCGTCACTACCTCCCCGATCTGGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCC 1219 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAA 146 |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1220 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAGCCGAA 1263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510337227776