Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Wuchereria_20bancrofti_20[genbank_20GCA_5F001555675.1_202016-02-09] 5,105 sequences; 90,325,107 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1267 89.7 8e-16 seq3104 80.6 4e-13 seq3922 78.8 1e-12 >seq1267 Length=2447 Score = 89.7 bits (98), Expect = 8e-16 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| |||| ||||||||| | |||||||||| ||| Sbjct 1701 GTACAAAGGGCAGGGACGTAATCAACGTGAGC-TGATGACTCACATTTACTAGGAA-TTC 1644 Query 61 CTCGTTGAAGACCAACAATTGCAAT 85 |||||| ||| || ||||||||| Sbjct 1643 CTCGTTCAAG-GGAATAATTGCAAT 1620 >seq3104 Length=7937 Score = 80.6 bits (88), Expect = 4e-13 Identities = 89/116 (77%), Gaps = 6/116 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| || |||||||| | |||||||||| ||| Sbjct 3558 GTACAAAGGGCAGGGACGTAATCAACGTGA----GATGACTCACATTTACTAGGAA-TTC 3504 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG 116 |||||| ||| || ||||||||| | ||| ||||| | | |||||||| Sbjct 3503 CTCGTTCAAG-GGAATAATTGCAATTCCTGACCCCGATCACTGAGGATTTTCAAAG 3449 >seq3922 Length=16709 Score = 78.8 bits (86), Expect = 1e-12 Identities = 70/85 (82%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| ||| ||||| |||| | | ||||||||| ||| Sbjct 6624 GTACAAAGGGCAGGGACGTAATCAACGTGAG-TTGATAACTCACACATACTAGGAA-TTC 6567 Query 61 CTCGTTGAAGACCAACAATTGCAAT 85 || || ||| || ||||||||| Sbjct 6566 GTCATTCAAGGGAAATAATTGCAAT 6542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751962810075