Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1055 82.4 8e-14 >seq1055 Length=5557 Score = 82.4 bits (90), Expect = 8e-14 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || |||| |||||||||||| ||| ||| ||| Sbjct 1615 CAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 1556 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| || | |||||||||||| || Sbjct 1555 GAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAA 1521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531177625192