Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28] 4,348 sequences; 547,288,241 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1055 178 1e-42 >seq1055 Length=5557 Score = 178 bits (196), Expect = 1e-42 Identities = 122/138 (88%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 21 AGGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATT 80 || ||||||||| |||| | | |||||||||||||| ||||| |||||||||| Sbjct 1499 AGCGACTTGCTCGTGGAGCTGAAATCAGTCGAAGATACCAGCTGGCTGCAACTGTTTATT 1440 Query 81 AAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTG 140 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1439 AAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGGTG 1380 Query 141 CCGGAAGGTTAATTGATG 158 |||||||||||||||||| Sbjct 1379 CCGGAAGGTTAATTGATG 1362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476779916588