Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonorchis_20sinensis_20[genbank_20GCA_5F000236345.1_202011-11-28]
4,348 sequences; 547,288,241 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq2475 96.9 4e-18
seq2360 87.8 2e-15
>seq2475
Length=681215
Score = 96.9 bits (106), Expect = 4e-18
Identities = 131/179 (73%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACC 67
|| ||||||||||| | ||| ||| | |||||||||||| | ||| ||| | | |
Sbjct 614116 ACGTTTACTTTGAACACATTTGAGTGCTCAAAGCAGGCCCGTGTGCCTGAAAATTCTCGC 614175
Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127
|||||||||| ||||||||| | ||||| |||||||| ||||| | ||| | |||||
Sbjct 614176 ATGGAATAATGGAATAGGAC-TTCGGTTTTATTTTGTTGGTTT-TCGGATCCGAAGTAAT 614233
Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
| | || | ||| || |||||| | |||| || | ||||||||||||||||
Sbjct 614234 GGTTAAAAGGGACAGACGGGGGCATTTGTATGGTGGCGTTAGTGGTGAAATTCTTGGAT 614292
>seq2360
Length=1183466
Score = 87.8 bits (96), Expect = 2e-15
Identities = 130/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTA 65
|||| ||||||||||| ||||| ||| | |||||||||||| | ||| ||| | |
Sbjct 843198 GGACGTTTACTTTGAACAAATTTGAGTGCTCAAAGCAGGCCCGTGTGCCTGAAAATTCTT 843139
Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTA 125
| ||||| ||| |||||||| | || || |||||||| ||||| | ||| | |||
Sbjct 843138 GCCTGGAACAATGGAATAGGA-TTTCGATTATATTTTGTTGGTTT-TCGGATCCGAAGTA 843081
Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
||| | || | ||| || ||| || | |||| | | | ||||||||||||||||
Sbjct 843080 ATGGTTAAAAGGGACAGACGGTGGCATTTGTATGGCGGTTTTAGAGGTGAAATTCTTGGA 843021
Query 186 T 186
|
Sbjct 843020 T 843020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511978433920
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |