Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dicrocoelium_20dendriticum_20[genbank_20GCA_5F000950715.1_202014-09-
24] 478,538 sequences; 547,921,014 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq183909 273 7e-71
seq420478 264 4e-68
seq32369 255 2e-65
seq273507 226 9e-57
seq41031 199 1e-48
seq174525 172 2e-40
seq275020 170 6e-40
seq418288 127 7e-27
seq4318 122 3e-25
seq338527 109 2e-21
seq253439 104 8e-20
seq442262 102 3e-19
seq322867 87.8 6e-15
seq356084 86.0 2e-14
>seq183909
Length=1062
Score = 273 bits (302), Expect = 7e-71
Identities = 211/250 (84%), Gaps = 12/250 (5%)
Strand=Plus/Minus
Query 194 aaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC-------CGAAACGGCTC----CCA 242
|| |||| || | ||| ||||||||||| | ||| ||||| ||| |||
Sbjct 715 AAGAAACAATGACGGTGGTGGTATTTCATTGACGCTCAGCCCCGAAAAACCTCGCTGCCA 656
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
||||||||||||| ||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct 655 CTTATTCTACACCCGTCATGTCTCCTCACAAAGTCGGGCTACAGTCAAGCTCAACAGGGT 596
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
|||||||||| ||| ||| || ||||||||||||||||||||| |||||||||||||||
Sbjct 595 CTTCTTTCCC-GCTACTTCTGCGAAGCCCGTTCCCTTGGCTGTGTTTTCGCTAGATAGTA 537
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct 536 GATAGGGACAGTGGGAATCACGTTAATCCATTCATGCGCGTCACTAGTTAGATGATGAGG 477
Query 423 CATTTGGCTA 432
||||||||||
Sbjct 476 CATTTGGCTA 467
Score = 78.8 bits (86), Expect = 3e-12
Identities = 84/111 (76%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| ||| || || |||| || || |||| | |||| ||||||||||||||
Sbjct 977 CTTTTACTCCACGCCAGGTTTCCGTCCTGGCTGAGCTCACCTTGGGACACCTGCGTTAAC 918
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCA 117
||| ||||||| |||||||| |||||||||| ||| ||| |||| |||
Sbjct 917 ATTTGGCAGATGTACCGCCCCAATCAAACTCCCCGCCTAACATTGTCTTCA 867
>seq420478
Length=665
Score = 264 bits (292), Expect = 4e-68
Identities = 158/166 (95%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327
||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |
Sbjct 11 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTCTGCCCA 70
Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387
|| ||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 71 GCTCGTTCCCTTGGCTATGGTTTCGCTAGCTAGTAGATAGGGAGAGTGGGAATCTCGTTA 130
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 131 ATCCACTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 176
>seq32369
Length=2212
Score = 255 bits (282), Expect = 2e-65
Identities = 219/270 (81%), Gaps = 12/270 (4%)
Strand=Plus/Plus
Query 173 TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC---- 228
|| || || | ||| ||| ||| |||| || | ||| ||||||||||| | |||
Sbjct 795 TTTCGTTTTACTGAATAATCAAAGAAACAATGACGGTGGTGGTATTTCATTGACGCTCAA 854
Query 229 ---CGAAACGGCTCCC----ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGAC 281
||||| ||| | |||||||||||||| ||| ||| ||||||||||| ||
Sbjct 855 CCCCGAAAGACCTCGCTGTTACTTATTCTACACCCGTCATGTCTCCTCACAAAGTCGAAC 914
Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341
||||||||||||||||||||||||||||||| ||| || || |||||||||||||| |
Sbjct 915 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCC-GCTACTTTTGCGAAGCCCGTTCCCTTAG 973
Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401
|||||||||||||||||||||||||||||||||| |||| ||| ||| |||| ||||||
Sbjct 974 TTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGCAATCACGTGAATGCATTTATGCGC 1033
Query 402 GTCACTAATTAGATGACGAGGCATTTGGCT 431
|||||||||||||||| |||||||||||||
Sbjct 1034 GTCACTAATTAGATGATGAGGCATTTGGCT 1063
>seq273507
Length=837
Score = 226 bits (250), Expect = 9e-57
Identities = 137/145 (94%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 274 AGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGT 333
||||||||||||||||| ||||||||||||| ||||| ||||| |||| |||||||||||
Sbjct 308 AGTCGGACTAGAGTCAATCTCAACAGGGTCTCCTTTCTCCGCTAATTCTGCCAAGCCCGT 367
Query 334 TCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCAT 393
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 368 TCCCTTGGATGTGGTTTCGCTAGATAGTGGATAGGGACAGTGGGAATCTCGTTAATCCAT 427
Query 394 TCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||||||||| |||
Sbjct 428 TCATGCGCGTCACTAATTAGACGAC 452
>seq41031
Length=2030
Score = 199 bits (220), Expect = 1e-48
Identities = 121/128 (95%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||| |||| |||||||||||||| ||||||||||| ||||||||||| |||
Sbjct 314 TCTTTCCCCGCCAATTCTGCCAAGCCCGTTCCTTTGGCTGTGGTCTCGCTAGATAGCAGA 255
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 254 TAGGGACAGTGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 195
Query 425 TTTGGCTA 432
||||||||
Sbjct 194 TTTGGCTA 187
>seq174525
Length=1098
Score = 172 bits (190), Expect = 2e-40
Identities = 122/140 (87%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
|||| ||||| |||||||||||| |||| |||| |||| |||||||||| |||||| |
Sbjct 235 TCAATGGGGTCATCTTTCCCCGCTAATTCTGCCAGGCCCATTCCCTTGGCCATGGTTTTG 294
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
|||||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||
Sbjct 295 CTAGATAGTAAATAGGGACGGTGGGAATCTCGTTAATCCATTCATGTCTGTCTCTAATTA 354
Query 413 GATGACGAGGCATTTGGCTA 432
| ||||||||||||||| ||
Sbjct 355 GTTGACGAGGCATTTGGTTA 374
>seq275020
Length=835
Score = 170 bits (188), Expect = 6e-40
Identities = 96/97 (99%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 336 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATTTCGTTAATCCATTC 60
Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
|||||||||||||||||||||||||||||||||||||
Sbjct 61 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 97
>seq418288
Length=672
Score = 127 bits (140), Expect = 7e-27
Identities = 70/70 (100%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 60
Query 422 GCATTTGGCT 431
||||||||||
Sbjct 61 GCATTTGGCT 70
>seq4318
Length=4002
Score = 122 bits (134), Expect = 3e-25
Identities = 69/70 (99%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 436 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGA 495
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 70 TAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTGAATTTCTTCACTTTGA 11
Query 496 CATTCAGAGC 505
||||||||||
Sbjct 10 CATTCAGAGC 1
>seq338527
Length=766
Score = 109 bits (120), Expect = 2e-21
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515
|||||||| ||||||||||| || |||||||||||||||| || ||||||||| ||||||
Sbjct 128 CCGCCGTTGACCCGCGCTTGATTTAATTTCTTCACTTTGAGATGCAGAGCACTAGGCAGA 69
Query 516 AATCACATTGCGTCA 530
|||||||||||||||
Sbjct 68 AATCACATTGCGTCA 54
>seq253439
Length=868
Score = 104 bits (114), Expect = 8e-20
Identities = 75/87 (86%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 444 TCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGA 503
||||| | | | |||||||||| | | |||| ||||||||| |||| ||||||||||||
Sbjct 154 TCATACTAATTACCGCCGTTTATTCACCCTTGATTGAATTTCCTCACCTTGACATTCAGA 95
Query 504 GCACTGGGCAGAAATCACATTGCGTCA 530
|||||||||||||||||||||| ||||
Sbjct 94 GCACTGGGCAGAAATCACATTGTGTCA 68
>seq442262
Length=585
Score = 102 bits (112), Expect = 3e-19
Identities = 97/124 (78%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345
|||||| ||||| ||||||||||||||||| |||||||||| || ||| || ||
Sbjct 189 GTCAAGTTCAACGAGGTCTTCTTTCCCCGCTAGTTCCGCCAAGTCCATTCTTTTCCTCGT 248
Query 346 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 405
||| ||||||||| |||| ||||||||||||| ||||||| ||| |||| | |||
Sbjct 249 ACGTTCCCTAGATAGTGGATATGGACAGTGGGAATTACGTTAATGTATTTATGCACCTCA 308
Query 406 CTAA 409
| ||
Sbjct 309 CGAA 312
>seq322867
Length=781
Score = 87.8 bits (96), Expect = 6e-15
Identities = 48/48 (100%), Gaps = 0/48 (0%)
Strand=Plus/Minus
Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 734
>seq356084
Length=750
Score = 86.0 bits (94), Expect = 2e-14
Identities = 47/47 (100%), Gaps = 0/47 (0%)
Strand=Plus/Plus
Query 386 TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3 TAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 49
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1627374946624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |