Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq24578 120 5e-25 seq24330 93.3 6e-17 >seq24578 Length=6190 Score = 120 bits (132), Expect = 5e-25 Identities = 173/235 (74%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| ||||| ||| ||| ||||| || |||||| |||||||| |||| | Sbjct 4981 GTACAAAGGGCAGAGACGTTATCAGCGCAAGCTT-ATTACTCGCACTTACTAGAAATT-C 5038 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCC---CATCACGATGAAATTTCAAAGA 117 |||||| | | ||||||| ||| || ||||| ||| ||| ||| || || Sbjct 5039 CTCGTTCATAAGGAACAATTCCAAGCCTCGATCCCTGTCATGACGGTGA--TTAGCCAGC 5096 Query 118 TTACCCGGACCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 || | || |||| | || ||| |||||||||| | ||| ||||||| |||| Sbjct 5097 TTGTTCAACCCATTCGGGCCAGAAGATCAGACTCGTTGGTACCGTCATTGTAGCGTGCGT 5156 Query 177 GCGGCCCAGAACAT-CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230 ||||||| | |||| | || |||| |||||||||| ||||| ||||| |||||| Sbjct 5157 GCGGCCCCGGACATCCAAAAGGCAGCACAGACCTGCTATTG-CTCAA--TTCCGT 5208 >seq24330 Length=6232 Score = 93.3 bits (102), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| |||||||||||| ||||||| ||||| |||||| || ||||||||||| ||| Sbjct 4629 GTACAAGAGGCAGGGACGTAATCAACGCAAGCTT-ATGACTTGCACTTACTAGGAA-TTC 4686 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | | || |||| || || ||||| ||| |||| || | ||| Sbjct 4687 CTCGTTCACGGGGAAAAATTCGAAGCCTCGATCCCTGTCATGATGGTGATTGACCAATTC 4746 Query 121 CCCGGAC-CTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 || || || |||| | || | | |||||||||| | ||| |||| ||||||||| Sbjct 4747 GCCCAACACTTTCGGACCAGAAGGTCAGACTCGTTGGCACCGTCATTGTAACGCGCGTGC 4806 Query 179 GGCCCAGAACATCT 192 || | | |||||| Sbjct 4807 AGCTCCGGACATCT 4820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750977958210