Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09-
25] 140,294 sequences; 531,434,409 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq24578 120 5e-25
seq24330 93.3 6e-17
>seq24578
Length=6190
Score = 120 bits (132), Expect = 5e-25
Identities = 173/235 (74%), Gaps = 12/235 (5%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||| ||||| ||| ||| ||||| || |||||| |||||||| |||| |
Sbjct 4981 GTACAAAGGGCAGAGACGTTATCAGCGCAAGCTT-ATTACTCGCACTTACTAGAAATT-C 5038
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCC---CATCACGATGAAATTTCAAAGA 117
|||||| | | ||||||| ||| || ||||| ||| ||| ||| || ||
Sbjct 5039 CTCGTTCATAAGGAACAATTCCAAGCCTCGATCCCTGTCATGACGGTGA--TTAGCCAGC 5096
Query 118 TTACCCGGACCTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGT 176
|| | || |||| | || ||| |||||||||| | ||| ||||||| ||||
Sbjct 5097 TTGTTCAACCCATTCGGGCCAGAAGATCAGACTCGTTGGTACCGTCATTGTAGCGTGCGT 5156
Query 177 GCGGCCCAGAACAT-CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT 230
||||||| | |||| | || |||| |||||||||| ||||| ||||| ||||||
Sbjct 5157 GCGGCCCCGGACATCCAAAAGGCAGCACAGACCTGCTATTG-CTCAA--TTCCGT 5208
>seq24330
Length=6232
Score = 93.3 bits (102), Expect = 6e-17
Identities = 140/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||| |||||||||||| ||||||| ||||| |||||| || ||||||||||| |||
Sbjct 4629 GTACAAGAGGCAGGGACGTAATCAACGCAAGCTT-ATGACTTGCACTTACTAGGAA-TTC 4686
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | | || |||| || || ||||| ||| |||| || | |||
Sbjct 4687 CTCGTTCACGGGGAAAAATTCGAAGCCTCGATCCCTGTCATGATGGTGATTGACCAATTC 4746
Query 121 CCCGGAC-CTGTCGGCCAAGGTGAT-AGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|| || || |||| | || | | |||||||||| | ||| |||| |||||||||
Sbjct 4747 GCCCAACACTTTCGGACCAGAAGGTCAGACTCGTTGGCACCGTCATTGTAACGCGCGTGC 4806
Query 179 GGCCCAGAACATCT 192
|| | | ||||||
Sbjct 4807 AGCTCCGGACATCT 4820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750977958210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |