Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09-
25] 140,294 sequences; 531,434,409 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq101785 122 4e-25
seq54569 116 2e-23
seq14803 113 2e-22
seq23726 96.9 1e-17
seq13830 87.8 7e-15
seq50702 78.8 4e-12
>seq101785
Length=1110
Score = 122 bits (134), Expect = 4e-25
Identities = 90/104 (87%), Gaps = 1/104 (1%)
Strand=Plus/Minus
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
||||| |||||||||| |||| |||||||||||||||| |||||||||| ||||||
Sbjct 560 TGGTGGACTATGCCTGCGTAGGTTGAAGCCAGAGGAAACGCTGGTGGAGGACCGCAGCAA 501
Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG-GGCGA 683
||||| |||||||||||||||||||| || ||||||| |||||
Sbjct 500 TTCTGACGTGCAAATCGATCGTCAAACGTGAGTATAGGTGGCGA 457
>seq54569
Length=2972
Score = 116 bits (128), Expect = 2e-23
Identities = 94/114 (82%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629
||||||||||||||| || || || || |||| | |||||||||||||||| ||||||
Sbjct 802 GACCCGAAAGATGGTAAAGTACGCTTGTGTAGGTTAAAGCCAGAGGAAACTCCGGTGGAT 743
Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| |||| || ||||| |||||||||||||||||||| || | ||| ||||||
Sbjct 742 GACCGCAACGATTCTGACGTGCAAATCGATCGTCAAACATGAGCATACGGGCGA 689
>seq14803
Length=8562
Score = 113 bits (124), Expect = 2e-22
Identities = 92/112 (82%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631
||||||||||||||||| |||| || || |||||||||||||||| |||||||||
Sbjct 6884 CCCGAAAGATGGTGAACCATGCTTGCGTAAATTGAAGCCAGAGGAAACCTTGGTGGAGGA 6943
Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|| ||| | ||| ||||||||||||||||||||| || | ||| ||||||
Sbjct 6944 CTGCCGCGATCCTGACGTGCAAATCGATCGTCAAATGTGAGCATAAGGGCGA 6995
>seq23726
Length=6348
Score = 96.9 bits (106), Expect = 1e-17
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630
|||||||| || ||||||| ||| || ||| |||||| ||| ||||||||| |||| |
Sbjct 6093 ACCCGAAATATAGTGAACTCTGCTTGCGTAGATTGAAGCTAGACGAAACTCTGATGGAAG 6152
Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
||||||| ||||| ||||||||||||||| ||| || || ||| |||
Sbjct 6153 ACCGCAGCGATTCTGATGTGCAAATCGATCGTGAAACGTGAGTGTAGAGGC 6203
>seq13830
Length=8901
Score = 87.8 bits (96), Expect = 7e-15
Identities = 74/91 (81%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
||||| || |||| |||||||||||||||||||||| | || ||||||| ||||| |
Sbjct 5058 CTATGTTTGCGTAGGTTGAAGCCAGAGGAAACTCTGGTAGCGGACCGCAGCGATTCTGAC 5117
Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGG 678
| |||||||||||||||| | | ||||||
Sbjct 5118 GCTCAAATCGATCGTCAAAATGGACTATAGG 5148
>seq50702
Length=3235
Score = 78.8 bits (86), Expect = 4e-12
Identities = 75/96 (78%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630
||||||||||| ||||||| ||| || ||| |||||| | | ||||||||| ||| |
Sbjct 1102 ACCCGAAAGATAGTGAACTCTGCTTGCGTAGATTGAAGCTAAACGAAACTCTGACGGAAG 1043
Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666
||||||| ||||| ||||||| |||||| |||
Sbjct 1042 ACCGCAGCGATTCTGATGTGCAAAATGATCGTGAAA 1007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2076990693700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |