Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq101785 122 4e-25 seq54569 116 2e-23 seq14803 113 2e-22 seq23726 96.9 1e-17 seq13830 87.8 7e-15 seq50702 78.8 4e-12 >seq101785 Length=1110 Score = 122 bits (134), Expect = 4e-25 Identities = 90/104 (87%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||| |||||||||| |||| |||||||||||||||| |||||||||| |||||| Sbjct 560 TGGTGGACTATGCCTGCGTAGGTTGAAGCCAGAGGAAACGCTGGTGGAGGACCGCAGCAA 501 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG-GGCGA 683 ||||| |||||||||||||||||||| || ||||||| ||||| Sbjct 500 TTCTGACGTGCAAATCGATCGTCAAACGTGAGTATAGGTGGCGA 457 >seq54569 Length=2972 Score = 116 bits (128), Expect = 2e-23 Identities = 94/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 ||||||||||||||| || || || || |||| | |||||||||||||||| |||||| Sbjct 802 GACCCGAAAGATGGTAAAGTACGCTTGTGTAGGTTAAAGCCAGAGGAAACTCCGGTGGAT 743 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | |||| || ||||| |||||||||||||||||||| || | ||| |||||| Sbjct 742 GACCGCAACGATTCTGACGTGCAAATCGATCGTCAAACATGAGCATACGGGCGA 689 >seq14803 Length=8562 Score = 113 bits (124), Expect = 2e-22 Identities = 92/112 (82%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 ||||||||||||||||| |||| || || |||||||||||||||| ||||||||| Sbjct 6884 CCCGAAAGATGGTGAACCATGCTTGCGTAAATTGAAGCCAGAGGAAACCTTGGTGGAGGA 6943 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||| | ||| ||||||||||||||||||||| || | ||| |||||| Sbjct 6944 CTGCCGCGATCCTGACGTGCAAATCGATCGTCAAATGTGAGCATAAGGGCGA 6995 >seq23726 Length=6348 Score = 96.9 bits (106), Expect = 1e-17 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||| || ||||||| ||| || ||| |||||| ||| ||||||||| |||| | Sbjct 6093 ACCCGAAATATAGTGAACTCTGCTTGCGTAGATTGAAGCTAGACGAAACTCTGATGGAAG 6152 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||||||| ||||| ||||||||||||||| ||| || || ||| ||| Sbjct 6153 ACCGCAGCGATTCTGATGTGCAAATCGATCGTGAAACGTGAGTGTAGAGGC 6203 >seq13830 Length=8901 Score = 87.8 bits (96), Expect = 7e-15 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647 ||||| || |||| |||||||||||||||||||||| | || ||||||| ||||| | Sbjct 5058 CTATGTTTGCGTAGGTTGAAGCCAGAGGAAACTCTGGTAGCGGACCGCAGCGATTCTGAC 5117 Query 648 GTGCAAATCGATCGTCAAATTTGGGTATAGG 678 | |||||||||||||||| | | |||||| Sbjct 5118 GCTCAAATCGATCGTCAAAATGGACTATAGG 5148 >seq50702 Length=3235 Score = 78.8 bits (86), Expect = 4e-12 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||| ||||||| ||| || ||| |||||| | | ||||||||| ||| | Sbjct 1102 ACCCGAAAGATAGTGAACTCTGCTTGCGTAGATTGAAGCTAAACGAAACTCTGACGGAAG 1043 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 ||||||| ||||| ||||||| |||||| ||| Sbjct 1042 ACCGCAGCGATTCTGATGTGCAAAATGATCGTGAAA 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2076990693700