Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09-
25] 140,294 sequences; 531,434,409 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq24330 80.6 2e-13
seq1752 73.4 2e-11
seq45261 71.6 8e-11
>seq24330
Length=6232
Score = 80.6 bits (88), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 3/73 (4%)
Strand=Plus/Plus
Query 52 ACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAA 111
||||| ||||| ||| ||||||| ||||||||||| |||||||| |||||||||||||
Sbjct 4592 ACTAAACCATTCAATT-GGTAGTA-GCGACGGGCGGTGTGTACAAGAGGCAGGGACGTAA 4649
Query 112 TACAACGCAAGCT 124
| |||||||||||
Sbjct 4650 T-CAACGCAAGCT 4661
>seq1752
Length=20995
Score = 73.4 bits (80), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|| ||||| ||||| || ||| ||||| ||||||||||| |||||||||||| ||||||
Sbjct 6263 CTTACTAAACCATT-CACTCGATAGTA-GCGACGGGCGGTTTGTACAAAGGGCTGGGACG 6320
Query 109 TAATACAACGCAAGCT 124
|||| || |||||||
Sbjct 6321 TAAT-CAGTGCAAGCT 6335
>seq45261
Length=3657
Score = 71.6 bits (78), Expect = 8e-11
Identities = 52/58 (90%), Gaps = 2/58 (3%)
Strand=Plus/Minus
Query 67 TCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
||||| | ||||||||||||| |||||||| ||||||||||||||| || ||||||||
Sbjct 2015 TCGGTGG-AAGCGACGGGCGGTGTGTACAACGGGCAGGGACGTAAT-CAGCGCAAGCT 1960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300404370920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |