Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq24578 138 2e-30 seq24330 107 4e-21 >seq24578 Length=6190 Score = 138 bits (152), Expect = 2e-30 Identities = 166/222 (75%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAG-ATGTTCTGGGCCGCACGCGCGCTACAC 167 ||||| ||||| |||||||||| |||| || | |||| | ||||||||||| ||||||| Sbjct 5202 TTGAG-CAATAGCAGGTCTGTGCTGCCTTTTGGATGTCCGGGGCCGCACGCACGCTACAA 5144 Query 168 TGACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226 |||| | ||||||||| | ||| || | ||| | || || || || | ||| | | Sbjct 5143 TGACGGTACCAACGAGTCTGATCTTCTGGCCCGAATGGGTTGAACAAGCTGGCTAATCAC 5084 Query 227 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286 ||| || ||||| ||| ||| |||| || || | |||||||||| |||||||| Sbjct 5083 CGTCATGACAGGGATCGAGGCTTGGAATTGTTCCTTATGAACGAGGAATTTCTAGTAAGT 5024 Query 287 GCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| || || ||| ||| |||| ||||| |||||||||||| Sbjct 5023 GCGAGTAATAAGCTTGCGCTGATAACGTCTCTGCCCTTTGTA 4982 >seq24330 Length=6232 Score = 107 bits (118), Expect = 4e-21 Identities = 139/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGGC 197 |||||| | | || ||||||||| |||| |||| | |||||||||| | | | || | | Sbjct 4820 AGATGTCCGGAGCTGCACGCGCGTTACAATGACGGTGCCAACGAGTCTGACCTTCTGGTC 4761 Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257 || ||| |||| | | || || | | || || ||||| ||| || |||| | Sbjct 4760 CGAAAGTGTTGGGCGAATTGGTCAATCACCATCATGACAGGGATCGAGGCTTCGAATTTT 4701 Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317 | | | | |||||||||| ||||||||| || ||||| ||| |||||||||||||||| Sbjct 4700 TCCCCGTGAACGAGGAATTCCTAGTAAGTGCAAGTCATAAGCTTGCGTTGATTACGTCCC 4641 Query 318 TGCCCTTTGTA 328 |||| ||||| Sbjct 4640 TGCCTCTTGTA 4630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945871135232