Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09-
25] 140,294 sequences; 531,434,409 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq24578 138 2e-30
seq24330 107 4e-21
>seq24578
Length=6190
Score = 138 bits (152), Expect = 2e-30
Identities = 166/222 (75%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 109 TTGAGGCAATAACAGGTCTGTGATGCCCTTAG-ATGTTCTGGGCCGCACGCGCGCTACAC 167
||||| ||||| |||||||||| |||| || | |||| | ||||||||||| |||||||
Sbjct 5202 TTGAG-CAATAGCAGGTCTGTGCTGCCTTTTGGATGTCCGGGGCCGCACGCACGCTACAA 5144
Query 168 TGACAGAGCCAACGAGT-TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTC 226
|||| | ||||||||| | ||| || | ||| | || || || || | ||| | |
Sbjct 5143 TGACGGTACCAACGAGTCTGATCTTCTGGCCCGAATGGGTTGAACAAGCTGGCTAATCAC 5084
Query 227 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286
||| || ||||| ||| ||| |||| || || | |||||||||| ||||||||
Sbjct 5083 CGTCATGACAGGGATCGAGGCTTGGAATTGTTCCTTATGAACGAGGAATTTCTAGTAAGT 5024
Query 287 GCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| || || ||| ||| |||| ||||| ||||||||||||
Sbjct 5023 GCGAGTAATAAGCTTGCGCTGATAACGTCTCTGCCCTTTGTA 4982
>seq24330
Length=6232
Score = 107 bits (118), Expect = 4e-21
Identities = 139/191 (73%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGGC 197
|||||| | | || ||||||||| |||| |||| | |||||||||| | | | || | |
Sbjct 4820 AGATGTCCGGAGCTGCACGCGCGTTACAATGACGGTGCCAACGAGTCTGACCTTCTGGTC 4761
Query 198 CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT 257
|| ||| |||| | | || || | | || || ||||| ||| || |||| |
Sbjct 4760 CGAAAGTGTTGGGCGAATTGGTCAATCACCATCATGACAGGGATCGAGGCTTCGAATTTT 4701
Query 258 TGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCC 317
| | | | |||||||||| ||||||||| || ||||| ||| ||||||||||||||||
Sbjct 4700 TCCCCGTGAACGAGGAATTCCTAGTAAGTGCAAGTCATAAGCTTGCGTTGATTACGTCCC 4641
Query 318 TGCCCTTTGTA 328
|||| |||||
Sbjct 4640 TGCCTCTTGTA 4630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945871135232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |