Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09-
25] 140,294 sequences; 531,434,409 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq42236 170 6e-40
seq40325 134 5e-29
seq60404 125 2e-26
seq60100 118 3e-24
seq120361 116 1e-23
seq67229 111 5e-22
seq49919 109 2e-21
seq2282 107 6e-21
seq8328 105 2e-20
seq85153 102 3e-19
seq37433 95.1 4e-17
seq21472 95.1 4e-17
seq124516 89.7 2e-15
seq64964 84.2 7e-14
seq45268 77.0 1e-11
seq27501 75.2 4e-11
>seq42236
Length=3922
Score = 170 bits (188), Expect = 6e-40
Identities = 96/97 (99%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 331 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 272
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
||||||||||||||||||||||||||||||| |||||
Sbjct 271 ACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAA 235
Score = 156 bits (172), Expect = 1e-35
Identities = 89/91 (98%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 441 GAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTC 500
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2792 GACTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCATTTTGACATTC 2733
Query 501 AGAGCACTGGGCAGAAATCACATTGCGTCAA 531
|||||||||||||||||||||||||||||||
Sbjct 2732 AGAGCACTGGGCAGAAATCACATTGCGTCAA 2702
>seq40325
Length=4103
Score = 134 bits (148), Expect = 5e-29
Identities = 160/212 (75%), Gaps = 19/212 (9%)
Strand=Plus/Plus
Query 175 CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAA-- 232
|||||||| | | |||||||| |||| || | || |||||| ||||| | ||||
Sbjct 606 CCGCTTCAATAAATAAGTAAAGAAACAATGATGGGAGTGGTTTTTCATA---GTCGAACG 662
Query 233 ACGG-CTCCCACTTATTCTACACCTCTC---AAGTCATTTCACAAAGTCGGACTAGAGTC 288
| || |||| | |||||| | | ||| ||| || |||||||||||||||
Sbjct 663 AGGGACTCCGAGGGG-----CACCTCCCGTAATGTCTCTTCGCAGAGTCGGACTAGAGTC 717
Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT-GGCTGTGG 347
||| ||||||| |||| ||| |||||||| ||||||||| ||||||| |||||| |
Sbjct 718 AAGTTCAACAGTGTCTCCTTG----GCTGATTCTGCCAAGCCCATTCCCTTTGGCTGTAG 773
Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAA 379
||||||||| ||||||||||||||||| ||||
Sbjct 774 TTTCGCTAGCTAGTAGATAGGGACAGTAGGAA 805
Score = 84.2 bits (92), Expect = 7e-14
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 9 TTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGT 68
||| ||||| || ||||||| || ||| | || | |||||||||| ||| | |
Sbjct 145 TTTACTCTATGCCAGGTTTCTGTCCTGGCTGAACTCACCGTGGGACACCTGCATTACGAT 204
Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCA 117
| |||||||| ||||||||| |||||||||||||||||| |||| |||
Sbjct 205 CTGACAGATGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTCTTCA 253
>seq60404
Length=2624
Score = 125 bits (138), Expect = 2e-26
Identities = 86/97 (89%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
|||||||||||| |||| ||||| ||||| | ||||||||||||||||||||| |||
Sbjct 1686 TTAAGAGAGTCAGCTTTACCCCCGCTGTTTAACTGCGCTTGGTTGAATTTCTTCAGTTTT 1745
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
|| ||||||||||||||||||||||||||||| ||||
Sbjct 1746 ACGTTCAGAGCACTGGGCAGAAATCACATTGCTTCAA 1782
>seq60100
Length=2644
Score = 118 bits (130), Expect = 3e-24
Identities = 82/93 (88%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 439 GAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACAT 498
|||||||| | |||| ||| |||||||| ||| |||||||||||||||||| ||||||||
Sbjct 2123 GAGAGTCAGACTTACCCCCACCGTTTACTCGCACTTGGTTGAATTTCTTCAGTTTGACAT 2064
Query 499 TCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
| ||||||||| ||||||||||||||| ||||
Sbjct 2063 TTAGAGCACTGAGCAGAAATCACATTGTATCAA 2031
>seq120361
Length=755
Score = 116 bits (128), Expect = 1e-23
Identities = 67/69 (97%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 755 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGCAATCACA 696
Query 523 TTGCGTCAA 531
||| |||||
Sbjct 695 TTGTGTCAA 687
>seq67229
Length=2277
Score = 111 bits (122), Expect = 5e-22
Identities = 82/95 (86%), Gaps = 2/95 (2%)
Strand=Plus/Plus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||| |||||||||| ||||||||||||||||||||||| || ||||| ||||||||
Sbjct 225 CTTAAAAGAGTCATAGCCACTCCCGCCGTTTACCCGCGCTTCTTTAAATTTATTCACTTT 284
Query 494 GACATTCAGAGCAC--TGGGCAGAAATCACATTGC 526
||| | |||||||| || |||||||| |||||||
Sbjct 285 GACTTCCAGAGCACTGTGAGCAGAAATTACATTGC 319
>seq49919
Length=3294
Score = 109 bits (120), Expect = 2e-21
Identities = 65/68 (96%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3294 CCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTACATAGGGA 3235
Query 371 CAGTGGGA 378
|||| |||
Sbjct 3234 CAGTAGGA 3227
>seq2282
Length=19246
Score = 107 bits (118), Expect = 6e-21
Identities = 76/87 (87%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499
||| ||||| || ||||||| |||| |||||||||||| ||||||||||| ||| |||
Sbjct 6127 AGAATCATACGTATTCCCGCCATTTATCCGCGCTTGGTTTGATTTCTTCACTGTGAGATT 6186
Query 500 CAGAGCACTGGGCAGAAATCACATTGC 526
||||||||||||||||||| |||||||
Sbjct 6187 CAGAGCACTGGGCAGAAATAACATTGC 6213
>seq8328
Length=11591
Score = 105 bits (116), Expect = 2e-20
Identities = 84/98 (86%), Gaps = 5/98 (5%)
Strand=Plus/Minus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCC-GCGCTTGGTTGAATTTCTTCACTTT 493
|||||||||||| ||||| ||| |||||||||| | |||||||||||||||||| |||
Sbjct 2191 TTAAGAGAGTCACAGTTATTCCGACCGTTTACCCAGTGCTTGGTTGAATTTCTTC--TTT 2134
Query 494 GA--CATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529
|| ||||||||||||||| |||||| |||||||||
Sbjct 2133 GAGGCATTCAGAGCACTGGAAAGAAATTGCATTGCGTC 2096
>seq85153
Length=1566
Score = 102 bits (112), Expect = 3e-19
Identities = 73/84 (87%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
|||||| | | ||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct 420 AGTTACCCGCACCGTTTACCCGCGTTTGGTTGAATTTCTTCAGTTCGACATTCAGAGCAC 361
Query 508 TGGGCAGAAATCACATTGCGTCAA 531
|| |||| || ||||||| ||||
Sbjct 360 CGGACAGATATGACATTGCATCAA 337
>seq37433
Length=4392
Score = 95.1 bits (104), Expect = 4e-17
Identities = 52/52 (100%), Gaps = 0/52 (0%)
Strand=Plus/Plus
Query 381 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 52
Score = 95.1 bits (104), Expect = 4e-17
Identities = 52/52 (100%), Gaps = 0/52 (0%)
Strand=Plus/Plus
Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4341 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 4392
>seq21472
Length=6806
Score = 95.1 bits (104), Expect = 4e-17
Identities = 54/55 (98%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 55 TTGAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 1
Score = 80.6 bits (88), Expect = 9e-13
Identities = 56/64 (88%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
|||||| |||||||||||||| ||| ||| ||||||||||||| |||| ||||||||||
Sbjct 3906 GACAGTAGGAATCTCGTTAATATATTTATGTGCGTCACTAATTAAATGAAGAGGCATTTG 3847
Query 429 GCTA 432
|||
Sbjct 3846 CCTA 3843
>seq124516
Length=696
Score = 89.7 bits (98), Expect = 2e-15
Identities = 51/52 (98%), Gaps = 0/52 (0%)
Strand=Plus/Minus
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
|||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 696 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 645
>seq64964
Length=2388
Score = 84.2 bits (92), Expect = 7e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 473 TTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
||||| |||||| |||||||||||||||||| ||||| ||||||||||||||||| |||
Sbjct 2218 TTGGTCGAATTTTTTCACTTTGACATTCAGAACACTGCGCAGAAATCACATTGCGGCAA 2160
>seq45268
Length=3657
Score = 77.0 bits (84), Expect = 1e-11
Identities = 65/80 (81%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 38 TGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTC 97
|||| | |||| |||||||||||||| | ||| |||||||| | |||||| |||||||
Sbjct 2460 TGAGCTCACCTTGGGACACCTGCGTTACGATTTGACAGATGTATCACCCCAGTCAAACTC 2401
Query 98 CCCACCTGACAATGTCATCA 117
|| ||||||| |||| |||
Sbjct 2400 TCCGCCTGACACTGTCTTCA 2381
>seq27501
Length=5681
Score = 75.2 bits (82), Expect = 4e-11
Identities = 73/92 (79%), Gaps = 3/92 (3%)
Strand=Plus/Minus
Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499
|||| ||||| || ||| |||||||||||| ||||| ||||| || |||||||||||
Sbjct 3241 AGAGACATAGATATAAGCGCTGTTTACCCGCGCATGGTTAAATTTATTAACTTTGACATT 3182
Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
||| || ||| ||||| |||||||||||
Sbjct 3181 TGGAGAAC-GGGGAGAAA--CCATTGCGTCAA 3153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1632905912512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |