Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09-
25] 140,294 sequences; 531,434,409 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq4536 174 5e-41
>seq4536
Length=15010
Score = 174 bits (192), Expect = 5e-41
Identities = 189/245 (77%), Gaps = 8/245 (3%)
Strand=Plus/Plus
Query 6 CATTCCAATTACA-AGACCCAAAAGA-GCCCTGTATCAGTATTTATTGTCACTACCTCCC 63
|||||| ||||| || ||||| ||| | || |||||||||| | ||||| |||||||
Sbjct 485 CATTCCGATTACGGAGTCCCAATAGAAGTCCCACATCAGTATTTTTCGTCACCACCTCCC 544
Query 64 C-GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122
| || |||| | ||||||||||||| | |||||| | ||| ||||||||||||||
Sbjct 545 CCGTACTGGGAGTTTGTAATTTGCGCGCTTTCTGCCTACATTGAGAGTGGTAGCCGTTTC 604
Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182
|||||||| |||||| |||||||||||| ||| |||||| || || |||||||||||
Sbjct 605 TCAGGCTCACTCTCCAGAATCGAACCCTGATT-CCCGTTGACCATTTTCACCATGGTAGG 663
Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242
| | || ||| | ||||||||||||||| ||||| | || || |||| | | ||
Sbjct 664 C----AGGTCACTATCAACAGTTGATAGGGCAGACATTTGCAGGACCCGTCGCTGACGCA 719
Query 243 AGGCC 247
|||||
Sbjct 720 AGGCC 724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1508280999424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |