Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diphyllobothrium_20latum_20[genbank_20GCA_5F000950535.1_202014-09- 25] 140,294 sequences; 531,434,409 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq4536 174 5e-41 >seq4536 Length=15010 Score = 174 bits (192), Expect = 5e-41 Identities = 189/245 (77%), Gaps = 8/245 (3%) Strand=Plus/Plus Query 6 CATTCCAATTACA-AGACCCAAAAGA-GCCCTGTATCAGTATTTATTGTCACTACCTCCC 63 |||||| ||||| || ||||| ||| | || |||||||||| | ||||| ||||||| Sbjct 485 CATTCCGATTACGGAGTCCCAATAGAAGTCCCACATCAGTATTTTTCGTCACCACCTCCC 544 Query 64 C-GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | || |||| | ||||||||||||| | |||||| | ||| |||||||||||||| Sbjct 545 CCGTACTGGGAGTTTGTAATTTGCGCGCTTTCTGCCTACATTGAGAGTGGTAGCCGTTTC 604 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||| |||||| |||||||||||| ||| |||||| || || ||||||||||| Sbjct 605 TCAGGCTCACTCTCCAGAATCGAACCCTGATT-CCCGTTGACCATTTTCACCATGGTAGG 663 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242 | | || ||| | ||||||||||||||| ||||| | || || |||| | | || Sbjct 664 C----AGGTCACTATCAACAGTTGATAGGGCAGACATTTGCAGGACCCGTCGCTGACGCA 719 Query 243 AGGCC 247 ||||| Sbjct 720 AGGCC 724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508280999424