Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_003219.1 Length=1911 Score E Sequences producing significant alignments: (Bits) Value seq640566 100 3e-18 seq20164 78.8 1e-11 >seq640566 Length=6178 Score = 100 bits (110), Expect = 3e-18 Identities = 164/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 1338 CATTCAATGAATAGTAGATCTAATTTCTGGTTACAAGACTTACAGGGAAAGGATATCTAT 1397 ||||||||||| || ||||| || | ||| ||||||| ||| | | |||||| || Sbjct 4466 CATTCAATGAACAGCAGATCAAACCTTTGGCTACAAGATTTAATCGACACGGATATTTAC 4525 Query 1398 GTTTTCGAGGAATTCTCTATGGATGTATTTAATGCTAATTACTTTAAAGCCCTATTGGAG 1457 | || || |||| | | | |||| |||||| | | || |||||||| ||||| || Sbjct 4526 ATATTTGAAGAATCCACGGTAAATGTTTTTAATAGTGAATATTTTAAAGCTCTATTAGAA 4585 Query 1458 GGTAGTATGCATGTAATGGTTGAAAAGAAGAATATGCCTAGTGTACATTTGGAGAGAAGA 1517 || | || ||||| ||||| ||||| ||||| | | |||||| |||| ||||| Sbjct 4586 GGAATTAATCATGTCATGGTGGAAAAAAAGAACCAACATGCTGTACACTTGGCACGAAGA 4645 Query 1518 CCTGTCATCACTACTGGCAA-TGAGTTCCCATGGAAACTAGTATCATCAACTGC 1570 ||| | ||||| || | || |||| || ||| || | || ||||| || || Sbjct 4646 CCTATTATCACAACAGAAAACCAAGTTTCC-TGGCAATTGGTGTCATCTACGGC 4698 >seq20164 Length=934 Score = 78.8 bits (86), Expect = 1e-11 Identities = 160/237 (68%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 1247 AACTAATGTAATATTAATGGTAGGTAAACCCAATTGCGGTAAATCCCTCTTTTGCAATGT 1306 ||| ||||||||| | | |||| |||| | || | ||||| | ||| || | Sbjct 304 AACAAATGTAATAACTAAGATAGG--AACCTATCTGTGTTAAATGATTATTTACAAAAAT 361 Query 1307 CTTATGCGCTGGACTCAAGACAGGAGCCGCTCATTCAATGAATAGTAGATCTAATTTCTG 1366 || || ||||| | || || | | |||| ||||| | | || | ||| ||||| || Sbjct 362 ATTGTGTTCTGGAATGAAATCATGTACAGCTCTTTCAAGGTACAGCATATCAAATTTATG 421 Query 1367 GTTACAAGACTTACAGGGAAAGGATATCTATGTTTTCGAGGAATTCTCTATGGATGTATT 1426 ||||||| ||| | || ||||| || |||| |||||||| | | ||||||| Sbjct 422 GTTACAACTTTTAATTGATAAAGATATTTACATTTTTGAGGAATTTGCATTAAATGTATT 481 Query 1427 TAATGCTAATTACTTTAAAGCCCTATTGGAGGGTAGTATGCATGTAATGGTTGAAAA 1483 |||||| | || |||||| | || | || ||| || | ||||||||| ||||| Sbjct 482 TAATGCATAATATTTTAAAACTTTACTAGAAGGTTCAATACTTGTAATGGTAGAAAA 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5965008028108