Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01-
28] 957 sequences; 110,837,706 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq748 134 2e-29
seq819 132 7e-29
>seq748
Length=96453
Score = 134 bits (148), Expect = 2e-29
Identities = 163/219 (74%), Gaps = 11/219 (5%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| ||||| |||||| ||||||||||||||| |
Sbjct 68629 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTT-ATGACTTGCGCTTACTAGGAATC-C 68572
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||| | | |||||| ||| | ||||| || ||| || ||
Sbjct 68571 CTCGTCCACGGGGCACAATTCCAAGCCCCGATCCC--------TGTGATTGACCAGTTTG 68520
Query 121 CCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||| ||| |||| | || | | ||||||||| | ||| |||||||||||||||
Sbjct 68519 CCCAACCCTCTCGGGCCAGAAGGTCTCACTCGTTGACACCGTCATTGTAGCGCGCGTGCG 68460
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218
|||| | |||||||||||||||||||||| |||||||||
Sbjct 68459 GCCCTGGACATCTAAGGGCATCACAGACCCGTTATTGCC 68421
>seq819
Length=201516
Score = 132 bits (146), Expect = 7e-29
Identities = 166/220 (75%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||| ||| ||||| ||||| || ||||||||||||| |
Sbjct 89056 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCTT-ATGACCTGCACTTACTAGGAATT-C 88999
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119
|||||| | | ||||||| ||| | ||||| |||||| | || | || ||
Sbjct 88998 CTCGTTCACGGGGAACAATTCCAAGCCCCGATCCCTGTCACGACGGTGATTGACCAGTTT 88939
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||| ||| |||| || | | ||| ||||| | ||| ||||||||||||||
Sbjct 88938 GCCCAACCCTCTCGGGACAGAAGGTCTCACTTGTTGACACCGTCATTGTAGCGCGCGTGC 88879
Query 179 GGC-CCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||| ||||| || ||||||||||| |||||||||||||||
Sbjct 88878 GGCTCCAGA-CACCTAAGGGCATCGCAGACCTGTTATTGC 88840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751993028255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |