Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq117 87.8 1e-15 >seq117 Length=1141 Score = 87.8 bits (96), Expect = 1e-15 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 10 GACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAG 69 ||||||| |||| || ||| |||| ||| |||| ||||| |||| ||| | || Sbjct 1141 GACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCGCATCGCCAG 1082 Query 70 TCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 1081 TCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 1034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278397502230