Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq934 87.8 8e-16 seq819 87.8 8e-16 >seq934 Length=1037200 Score = 87.8 bits (96), Expect = 8e-16 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 876617 GGAGAAGAAACAAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTA 876558 Query 61 CCGAATCC 68 ||||| || Sbjct 876557 CCGAAGCC 876550 >seq819 Length=201516 Score = 87.8 bits (96), Expect = 8e-16 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 90852 GGAGAAGAAACCAACCAGGATTCCCTCAGTAACGGCGAGTGAAGAGGGAGAAGCCCAGTA 90911 Query 61 CCGAATCC 68 ||||| || Sbjct 90912 CCGAAGCC 90919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230397932880