Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq300 80.6 8e-13 >seq300 Length=1428 Score = 80.6 bits (88), Expect = 8e-13 Identities = 129/183 (70%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||| ||| || ||| | ||||||| | |||||| ||| | | |||||||| Sbjct 322 CAAGTCATTATGGCCTAAATGCTGTGGGCTATAGACGTGCCACATACGCCTTTACAAAGG 263 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | |||| | | || | ||| |||||| ||| | | | | ||||||||||| Sbjct 262 GATGCGATATTGTGAAATGGAGCTAATCCCCAAAAAAGGAAAT-ATTATGGATTGTAGTC 204 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTG 484 || |||||||||| ||||| ||||| ||||||||||| |||| | | | |||||| Sbjct 203 TGTAACTCGACTACATGAAAAAGGAATTACTAGTAATCGTGAATCACCAACGTCACGGTG 144 Query 485 AAT 487 ||| Sbjct 143 AAT 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503985606720