Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq748 98.7 2e-18 seq819 82.4 1e-13 >seq748 Length=96453 Score = 98.7 bits (108), Expect = 2e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | |||||| ||||||||||||||||||| | |||||||||||||||||||| Sbjct 68492 ACTCGTTGACACCGTCATTGTAGCGCGCGTGCGGCCCTGGACATCTAAGGGCATCACAGA 68433 Query 62 CCTGTTATTGCC 73 || ||||||||| Sbjct 68432 CCCGTTATTGCC 68421 >seq819 Length=201516 Score = 82.4 bits (90), Expect = 1e-13 Identities = 63/72 (88%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGC-CCAGAACATCTAAGGGCATCACAG 60 ||| | || | |||||| ||||||||||||||||| ||||| || ||||||||||| ||| Sbjct 88910 ACTTGTTGACACCGTCATTGTAGCGCGCGTGCGGCTCCAGA-CACCTAAGGGCATCGCAG 88852 Query 61 ACCTGTTATTGC 72 |||||||||||| Sbjct 88851 ACCTGTTATTGC 88840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796792612917