Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq819 91.5 9e-17 seq748 91.5 9e-17 >seq819 Length=201516 Score = 91.5 bits (100), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 || ||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 89096 CTTACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 89039 Query 109 TAATACAACGCAAGCT 124 |||| || |||||||| Sbjct 89038 TAAT-CAGCGCAAGCT 89024 >seq748 Length=96453 Score = 91.5 bits (100), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 51 CACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTA 110 |||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 68667 CACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTA 68610 Query 111 ATACAACGCAAGCT 124 || || |||||||| Sbjct 68609 AT-CAGCGCAAGCT 68597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300797301260