Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01-
28] 957 sequences; 110,837,706 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq819 91.5 9e-17
seq748 91.5 9e-17
>seq819
Length=201516
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|| ||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 89096 CTTACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 89039
Query 109 TAATACAACGCAAGCT 124
|||| || ||||||||
Sbjct 89038 TAAT-CAGCGCAAGCT 89024
>seq748
Length=96453
Score = 91.5 bits (100), Expect = 9e-17
Identities = 67/74 (91%), Gaps = 3/74 (4%)
Strand=Plus/Minus
Query 51 CACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTA 110
|||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 68667 CACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTA 68610
Query 111 ATACAACGCAAGCT 124
|| || ||||||||
Sbjct 68609 AT-CAGCGCAAGCT 68597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300797301260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |